Gene Dred_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1008 
Symbol 
ID4956039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1079414 
End bp1079734 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content34% 
IMG OID640180178 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001112368 
Protein GI134298872 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA GAAGGAGACT TACAAATATT ATGATGATGT TGATTACTTA TGATGTAAAT 
ACTACAACCG ATGCAGGTAA AAAAAGGCTG CGTCGAGTTG CCAAACAGTG TATTAATTAT
GGCCAACGAG TGCAAAACTC TGTATTTGAG TGCTTATTAG ATCCAGCGCA GTTTGCAGAA
TTGAAAAATA CTCTTGAAGA AATAATTGAT AAGGAAAAAG ATAGTCTTAG GTACTATTAT
CTTGGTAGTA ACTGGAAAAA AAGGATTAAA CACGTTGGTG CTAAAGAGAT TTTTGACCCT
GAAGGGACTA TGATAATCTA A
 
Protein sequence
MEVRRRLTNI MMMLITYDVN TTTDAGKKRL RRVAKQCINY GQRVQNSVFE CLLDPAQFAE 
LKNTLEEIID KEKDSLRYYY LGSNWKKRIK HVGAKEIFDP EGTMII