Gene Dred_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0729 
Symbol 
ID4955601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp782856 
End bp783578 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID640179903 
ProductABC transporter related 
Protein accessionYP_001112093 
Protein GI134298597 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000155428 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATAG CTAAAAATGT TGAAAAAAGC TTTGGCCAAC TCCAGGTCCT TCGTGGCATT 
GATTTACATG TGAAAGAGCA GGAAGTTGTT GTTATTATTG GACCCTCCGG TTCTGGTAAA
AGTACTTTTC TGCGTTGCCT GAATTTATTA GAGGAACCCA CCTCTGGGGA AATCACTGTT
GATAACCTGT GTTTAACCGA TAAGAGTGCT GACATTAATA AAATTCGCCA AAATGTAGGG
ATGGTTTTCC AACGGTTTAA TTTGTTCCCT CACAAGACGG CCCTTGAGAA TATAACTTTG
GCCCCGTCAA AAGTAAAAGG GATTACAAAC AATGAAGCCA CTGCCATTGC CCGGGATTTA
CTGGTGAAGG TAGGTTTAAA GGATAAAGAG GATGTTTATC CCGACCAGCT ATCTGGTGGT
CAGCAACAAA GGGTGGCCAT TGCCCGGGCC CTTGCCATGA AACCAAAGGT TATGTTATTT
GATGAACCAA CTTCTGCGCT GGACCCTGAA ATGGTTGGAG AAGTTCTGGG CGTAATGAAA
GACTTAGCCC GTGAAGGTAT GACAATGGTT GTTGTTACGC ATGAAATGGG CTTTGCCCGT
GAGGTGGGGG ATCGGGTTTT ATTTATTGAT GAAGGGAAAG TTATCGAACA GGGAACTCCA
GAACAAATTT TTGGAAACCC TCAACATGAG CGTACTAAAG CCTTCTTAAA TAAGATTCTA
TAA
 
Protein sequence
MIIAKNVEKS FGQLQVLRGI DLHVKEQEVV VIIGPSGSGK STFLRCLNLL EEPTSGEITV 
DNLCLTDKSA DINKIRQNVG MVFQRFNLFP HKTALENITL APSKVKGITN NEATAIARDL
LVKVGLKDKE DVYPDQLSGG QQQRVAIARA LAMKPKVMLF DEPTSALDPE MVGEVLGVMK
DLAREGMTMV VVTHEMGFAR EVGDRVLFID EGKVIEQGTP EQIFGNPQHE RTKAFLNKIL