Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0729 |
Symbol | |
ID | 4955601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 782856 |
End bp | 783578 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640179903 |
Product | ABC transporter related |
Protein accession | YP_001112093 |
Protein GI | 134298597 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000155428 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCATAG CTAAAAATGT TGAAAAAAGC TTTGGCCAAC TCCAGGTCCT TCGTGGCATT GATTTACATG TGAAAGAGCA GGAAGTTGTT GTTATTATTG GACCCTCCGG TTCTGGTAAA AGTACTTTTC TGCGTTGCCT GAATTTATTA GAGGAACCCA CCTCTGGGGA AATCACTGTT GATAACCTGT GTTTAACCGA TAAGAGTGCT GACATTAATA AAATTCGCCA AAATGTAGGG ATGGTTTTCC AACGGTTTAA TTTGTTCCCT CACAAGACGG CCCTTGAGAA TATAACTTTG GCCCCGTCAA AAGTAAAAGG GATTACAAAC AATGAAGCCA CTGCCATTGC CCGGGATTTA CTGGTGAAGG TAGGTTTAAA GGATAAAGAG GATGTTTATC CCGACCAGCT ATCTGGTGGT CAGCAACAAA GGGTGGCCAT TGCCCGGGCC CTTGCCATGA AACCAAAGGT TATGTTATTT GATGAACCAA CTTCTGCGCT GGACCCTGAA ATGGTTGGAG AAGTTCTGGG CGTAATGAAA GACTTAGCCC GTGAAGGTAT GACAATGGTT GTTGTTACGC ATGAAATGGG CTTTGCCCGT GAGGTGGGGG ATCGGGTTTT ATTTATTGAT GAAGGGAAAG TTATCGAACA GGGAACTCCA GAACAAATTT TTGGAAACCC TCAACATGAG CGTACTAAAG CCTTCTTAAA TAAGATTCTA TAA
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Protein sequence | MIIAKNVEKS FGQLQVLRGI DLHVKEQEVV VIIGPSGSGK STFLRCLNLL EEPTSGEITV DNLCLTDKSA DINKIRQNVG MVFQRFNLFP HKTALENITL APSKVKGITN NEATAIARDL LVKVGLKDKE DVYPDQLSGG QQQRVAIARA LAMKPKVMLF DEPTSALDPE MVGEVLGVMK DLAREGMTMV VVTHEMGFAR EVGDRVLFID EGKVIEQGTP EQIFGNPQHE RTKAFLNKIL
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