Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0374 |
Symbol | |
ID | 4956423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 397103 |
End bp | 398425 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640179542 |
Product | phage portal protein, SPP1 |
Protein accession | YP_001111747 |
Protein GI | 134298251 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01538] phage portal protein, SPP1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTTAC AAGAGTATAT AAATGTTGTC CATGATGGCA AACCAGATTG GTTTGTAAGT GAATGTAATA GTTATTACCA CCAAAGCAGA ATCAATAATA TTATTGACAT AAAAGAATAT TTGAGTGGTA GTCATTTAAT CAATAATAGG CCAGCGGAAA TGTGGAACGG AAAAGTATTT GAACCCAGGA GAATAGTTTT ACAGTATGCT AAGACAGTTT TAAATTTTAG TACAAGTTAT CTGTTAAAAA ATCCCGTAAC AATTACAGGT GAAGAAAATG ACGTTAAAGT GATGAAGAAA GTTTATAAGC AAGGTAAATT CAATAGAACT GATTTAGATA TAATGGACAA GTTAGTTAAA TATGGGGCTA TCTATGAATA TATATTTGTT GATAAAGACG GAAAGATTAA GAGTAAATTG ATTAATCCAG AGGATGCTTA TCCTATCTAT AATGAGCAGG GAGAAATGAT TTGTTTTATA GAACATTATA CAACTGATTA TAATGTTAGT TACTACAATA TCTTTACTGA TAGTACAGTC CAAAAATGGT CTGATGCTGG AGGGGATTTT AATTTCTTAG GAGTTTTTAA TAATCCTAGT GGGCTACCTT GTGTTTATAA GAATTTGAAT GAGTTAGATA ATACAGATGG AAGATCAGAT TTAGAGGATT TTATAAACAT CATAGATAAT ATGGAGGATT TGATTAGTAA ATATACTGAC AGTATTTACA AGTTTCTAAA TCCTATTCCT GTAGTGATAG GACAGAGATT AAATATAAAA GATGGCAAAG GTGAGATACC AACAAACTTA GTTGGTGTTG GTCTTAATTT AGATGATGGA GCAGACATGA AATTTATTCA TGGTCAATTG GATTTTGAAA GTTTTGAGAG CGTTTGGAAG GTATTAAAGC AATCATTGTT AGATATTAGT AATACTCCTG CTGTCAGTAT GAATAATACA GATATTAGCA ATTTATCAGA AGTAAGTATA AAATTATTGT TTTCCCTAGC AGATATTAAA GCAGGATTAA ATGAGCGATA TATTAGAGAA GGATTTGAAC AAAGGTTTAA AAAAATAGAG AAATTGTTGA GGTTGCAGGG TATAGAGATT AATTCAGATA ATATTGATGT TGTGTTCCAG TATGCAAGGC CACTAAATGA AACGGATATT ATTGATAATA TTAAGGTGCT GAAGGAATTA GGAGTAATGA GTTTACAGAG TGCAATTGAG AATTGTCCAA TGATATACGA TGTTGGAAGT GAAATGGAAA GATTAGGTAA AGAGAGGAAT GGATTAGATA ATACGGATAT TGTAAATAGT TAA
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Protein sequence | MNLQEYINVV HDGKPDWFVS ECNSYYHQSR INNIIDIKEY LSGSHLINNR PAEMWNGKVF EPRRIVLQYA KTVLNFSTSY LLKNPVTITG EENDVKVMKK VYKQGKFNRT DLDIMDKLVK YGAIYEYIFV DKDGKIKSKL INPEDAYPIY NEQGEMICFI EHYTTDYNVS YYNIFTDSTV QKWSDAGGDF NFLGVFNNPS GLPCVYKNLN ELDNTDGRSD LEDFINIIDN MEDLISKYTD SIYKFLNPIP VVIGQRLNIK DGKGEIPTNL VGVGLNLDDG ADMKFIHGQL DFESFESVWK VLKQSLLDIS NTPAVSMNNT DISNLSEVSI KLLFSLADIK AGLNERYIRE GFEQRFKKIE KLLRLQGIEI NSDNIDVVFQ YARPLNETDI IDNIKVLKEL GVMSLQSAIE NCPMIYDVGS EMERLGKERN GLDNTDIVNS
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