Gene Dred_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0344 
Symbol 
ID4957452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp357936 
End bp358619 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID640179509 
Producthypothetical protein 
Protein accessionYP_001111717 
Protein GI134298221 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACACA AAATTTTGTA TCCAGGAGCA TTTCCTTTGG TTCAGCTTAA TCTGGAGCAA 
GGGGAATCGG TAAAGGCTGA GTCAGACGCT ATGGTTGCCA TGTCTTCCAC CATCGACGTG 
GAAGGAAAGA TGGATGGTGG GCTGTTGGGA GGACTTGCCC GTATGGTAGC GGGAGAGAGT 
TTTTTCTTTC AGACCCTAAC TGCCCGTAGG GGGGCCGGAG AAGTTCTCTT GGCTCCAGCG 
GTGCCCGGAG ACATTATTGA CGTAGAACTC GATGGCTCCT ATAGCCTGAT GGTACAAAAG 
GATGGTTTTC TTGCTGGTTC TGCGGGAATT CAGGTGTCCA CTAAAATGCA AAACCTTTCA 
CAGGGGTTAT TCTCAGGGGA AGGTTTTTTC GTCGTTAAGG TTAGCGGACA GGGAATTGTA 
TTTATTAATA CCTATGGAGG AATTCATGTA ATCAACCTTG AACCAGGCCA GGAATTTGTT 
GTGGATAACA GCCATTTAGT GGCCTGGCCT GAGTATATGA ATTTTTCAAT CGAAAAGGCA 
TCCAGCGGTT GGATTTCGAC CTTTACCTCG GGGGAAGTAG CTGTCTGCAA GTTCAGAGGA 
CCAGGACCGG TCATTATCCA AACTAGAAAC CCACGGGGTT TTGGAAATTG GATACGTCAA 
TTCATACCTC CTTCCAGAAA CTAA
 
Protein sequence
MKHKILYPGA FPLVQLNLEQ GESVKAESDA MVAMSSTIDV EGKMDGGLLG GLARMVAGES 
FFFQTLTARR GAGEVLLAPA VPGDIIDVEL DGSYSLMVQK DGFLAGSAGI QVSTKMQNLS 
QGLFSGEGFF VVKVSGQGIV FINTYGGIHV INLEPGQEFV VDNSHLVAWP EYMNFSIEKA 
SSGWISTFTS GEVAVCKFRG PGPVIIQTRN PRGFGNWIRQ FIPPSRN