Gene Dred_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0127 
Symbolndk 
ID4956371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp134129 
End bp134578 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID640179281 
Productnucleoside diphosphate kinase 
Protein accessionYP_001111502 
Protein GI134298006 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00040387 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGTA CTTACTTAAT GGTCAAGCCT GATGGAGTCC AAAGGGGTTT GATAGGGCAA 
ATTATCAGTA AATTTGAACA AAAGGGTTAT AAAATTGTTG GTTTAAAAAT GATGCAAATA
TCACGTGAAG TGGCAGAAAG GCATTATGGA GAACATGCAG GGAAACCCTT CTTTAACGGG
CTGGTTGATT TTATTACCTC CGGTCCAGTG GTTGCCATGG TCATAGAGGG CAAGGATGTT
GTTACCACTG CCAGAGAAAT GATGGGTGCC ACCAACCCAC TGAAGGCTGC CCCTGGTACT
ATCCGCGCCA CCTTTGGGGT GGATGTAGGG CGTAATATTA TCCATGGATC AGACTCTTTA
GAGAGTGCCC AAAGGGAAAT TGGAATTTTC TTTAAATCAG AAGAACTGAT AGACTACGAC
CGTGCCATTG ACACCTGGAT CTATGAGTAA
 
Protein sequence
MERTYLMVKP DGVQRGLIGQ IISKFEQKGY KIVGLKMMQI SREVAERHYG EHAGKPFFNG 
LVDFITSGPV VAMVIEGKDV VTTAREMMGA TNPLKAAPGT IRATFGVDVG RNIIHGSDSL
ESAQREIGIF FKSEELIDYD RAIDTWIYE