Gene Dred_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0103 
Symbol 
ID4958501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp109533 
End bp110276 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID640179257 
Producthypothetical protein 
Protein accessionYP_001111478 
Protein GI134297982 
COG category[S] Function unknown 
COG ID[COG2122] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.442013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATA CCCAGCGCAC CTATCGTGCT TTGCACCATC AAGGGGATCT TATCCATTTT 
CAAGTCAGTG TGGAGGAAAC AGATCTGGAT ATTGGTGTGC GACGTAAGTG TTTTACACCT
GAGATGGTAA GTTGGGTGGA AGATTCAATA AAGGAACAGA GGTCACTTTT GGAGGAATAC
ATTCAGAAGG ACCCTGTCTT TAAAACCACG CTGGAACCCT GTGGGATCTT ACCAGGAGCA
CCGGATATAG TGGTTAATAT GGCGGAGGCT GCTAAGTTGG CGGGTGTGGG TCCAATGGCC
GCCGTGGCAG GTGCATTTTC CCAAGTAATA GGAAAGGCAT TGAGTCGGCG TTCGCGGGAT
GTAATTGTGG AAAATGGGGG CGATATATTT ATTAAAGGTT CCCGGCCACG AAGGGTGGGT
ATTTTTGCCG GGACGTCTCC CTTTAGTCAT AAAATAGCCA TGGAAATTCA ACCCTGGCAA
ACTCCGGTGG GTATTTGTAC TTCGTCGGGC ACGGTGGGTC ATTCCCTAAG CTTTGGAAAT
TCTGATGCGG TTATTGTGTT AGCTCCCTCT GTTCCCCTGG CTGATGCGGT GGCCACGGCT
GGGGGAAATC TTGTGCAAAG TGAAATGGAT GTTCAAAGGG CGGTGGATTT TGCTGCCAGT
GTTAAGGGGG TAATTGGTGC AGTGGCCATT AAGGGGGAAA AGCTGGCGGC CTGGGGGCAA
ATCAAGTTGG TACCCATGGG CTAG
 
Protein sequence
MDYTQRTYRA LHHQGDLIHF QVSVEETDLD IGVRRKCFTP EMVSWVEDSI KEQRSLLEEY 
IQKDPVFKTT LEPCGILPGA PDIVVNMAEA AKLAGVGPMA AVAGAFSQVI GKALSRRSRD
VIVENGGDIF IKGSRPRRVG IFAGTSPFSH KIAMEIQPWQ TPVGICTSSG TVGHSLSFGN
SDAVIVLAPS VPLADAVATA GGNLVQSEMD VQRAVDFAAS VKGVIGAVAI KGEKLAAWGQ
IKLVPMG