Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3228 |
Symbol | |
ID | 5696091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3871361 |
End bp | 3872182 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265848 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_001531108 |
Protein GI | 158523238 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.120892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGG ACAACGCAAT ACATGAGGCC GCAAAAGTGC TGGCCGGCGC CTCCCGGGCC GCGGTCTTTT CCGGGGCCGG GGTTTCCGCG GAAAGCGGCA TTCCCACGTT CCGCGATCCC GGCGGCGTGT GGGACCGGCT CAACCCGGCC GAGGTGGGCG ACACACAAGG CCTGCTGGCC TCCCTGGAAA AGAACCCTGA AAAGCTGGTG GCCATGTTCA TGGAGCTTCT GGCCGTGTTT GACGCCGCGA TCCCCAACCC CGGCCACCGG GCCCTTTTCG ACCTGGAGCG CATGGGCATT CTTCAGGCCG TCATTACCCA GAACATTGAC AACCTGCACC AGGAGGCGGG CAACACCCAA GTGATCGAGA TGCACGGCAA CGGGTTCCGG TTCCGGTGCC TGAAGTGCCG GTCCCGCCGG TCCCATGAAC GCCATGCCCT GATCGGGCGG GTAAAAGAGC GGCTTTCCAC CCTGCCCGAT TTTTCACCGG CCTCGATTTT TGCCGCCATG CCCGACTGCG ACCTGTGCGG TTCGGGAATG CGGCCCGACG TGGTGATGTT CGGAGAGACC GTGATGGAGG TGGAAAACGC TTTTGCCGCG GCCCGCTCCT GCGACGTGAT GCTGGCCCTG GGCACGTCCG GTGTTGTCAC GCCCGCGGCC CAGATTCCGG CCGAGGCCAA GGCTTCCGGC GCAAAGGTGA TCGTGATCAA CCCCAATGAA AATGGTTTTG CCCGGGTGTG TGATATCTAT ATTTCCATGA AAACCGGTCA GGCCCTTCCC CGCATCGTGG AGCAGGTAAA AAAAATTCGA TCCGGGTCAT AA
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Protein sequence | MNLDNAIHEA AKVLAGASRA AVFSGAGVSA ESGIPTFRDP GGVWDRLNPA EVGDTQGLLA SLEKNPEKLV AMFMELLAVF DAAIPNPGHR ALFDLERMGI LQAVITQNID NLHQEAGNTQ VIEMHGNGFR FRCLKCRSRR SHERHALIGR VKERLSTLPD FSPASIFAAM PDCDLCGSGM RPDVVMFGET VMEVENAFAA ARSCDVMLAL GTSGVVTPAA QIPAEAKASG AKVIVINPNE NGFARVCDIY ISMKTGQALP RIVEQVKKIR SGS
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