Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3212 |
Symbol | |
ID | 5696074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3849320 |
End bp | 3851104 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641265831 |
Product | UbiD family decarboxylase |
Protein accession | YP_001531092 |
Protein GI | 158523222 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAACT GCCTGCAGGA GTTTATCACG GCCCTGGACA GGGCCGGCGA GTTGATGCGC GTCAAGCAGG AGGTGTCGCC GCATCTTGAG ATCAGCCGGC TCACCGATGA ACAGTCCAAA AGTCCGGGCG GGGGCAAGGC CCTTTTTTTT GAAAAGGTAA AGGGCAGCCG GTTTCCCGTG GCCACCAATA TTTTCGGCTC CTATCGCCGC ATTCACATGG CCCTGGGCGT AAAAAATCTG GACGAGCTGG GCGACCGGGT GCGCCAGTAC ACCGAGATGG ACCCGCCCAA AAGCCTGCGC CAGGCCGCCA GTCTGGTGCC CCGTGCTTTG CAGTTGGCCA GCTTCTTTCC CCGGTCCTGG GGATCGCGCA CCCCGCCCTG CCAGGAGGTG GTGCACACCG GCGACGATGT GGACCTTTCG AAAATCCCCG TTCTTCAGTG CTGGCCCAAG GATGGCGGCC CGTTTATCAC CCTGCCCGTG GTCTTTACGC AAAGCCTTGT CACGGGCCGG CGCAATGTGG GCATGTACCG GTTGCAGGTG TTTGACAGAA ACACCACGGG CATGCACTGG CACATTCACA AGGACGGCTC CCACTACTTC AACGAATATG TGGCCGCCGG CAAGCCCATG CCCGTGGCCG TGGCCATCGG CACGGACCCG GCCACCACCT ATGCCGCCAC GGCCCCGCTG CCCCGGGGCA TCGACGAGAT GATCCTGGCC GGGTTTATCC GCAAGCAGCC GGTGAAAATG GCAAAATGCG TCACCGTGGA CCTGGAGGTG CCGGCTTTGG CCGAGTTTGT GCTTGAAGGG TACGTAAACC CCGGCGAAAC CCGGATCGAG GGGCCCTTCG GCGACCACAC CGGCTACTAC TCCCTGGCCG ATCACTACCC GGTGTTTCAC GTCACCGCGA TTACCCATCG CAAAAATCCG GTCTACAGCG CTACCCTGGT GGGACCGCCG CCCATGGAGG ACTGTTACCT GGCCAAGGCC ACGGAACGGC TTTTTTTGCC CATGCTTCAG GCGGTGATGC CGGAAATCCT CGATTACTGG CTGCCCTGGG AGGGCGTGTT TCACAACATT GTCATTGTTT CCATTGACAA GGAGTTCCCC GGCCATGCCT ACAAGCTGAT CAACGGGTTG TGGGGCCAGG GCCAGATGAG CTTCTGCAAG GCCATCGTGG TGGTGGACAA AAATGTCAAC CCCCAGGACG GCGCGGCCGT GGCAAAGCGG CTGCTGACCC ACCTGGACAT TGACACCGAT ATCGTGGTGA CAAAGGGCGT ACTGGACGTG CTGGACCACT CAGCCCCGGA CGCCCTGTTC GGCGGCAAGA TCGGCATCGA CCTGTGCGAC CGGTTTACCG GCGAGCCGGA CCGGAAAAGC AAAGGCCCGG CCCCGCCGCT GCCCCTGGAC ATGGAGGCCC TTCTCAGGTC CGGCCTGCCG GAATGCATTG CCTGCCGGGA TCCGTTTGAC GGGCTGCCGG GGCTAAAAGA CGCGGTGGTC AACCGCATTG TGGTGCTGCA AATCGATAAA CAGCGCCCAG CGGACCAGAT GGCCGAAACC CTGTTTGAAA TTCAACAACT TGACATGGTT AGGGTGTTTG TATTATTTGA TAGGTCAGTC GACATCCTAA ACAACGGCCT GATGCTGTGG AAGGTGTTCA ATAATGTGTC CCCGGACCGG GACATGGTGA TAAAAAAAGG CAGAATGGTC ATTGACGCAT GCAGAAAAGG GCCGGTCGAC GGCCACACGC GGGAGTGGCC GGATGAATTA ACATTTGATA TTTAA
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Protein sequence | MFNCLQEFIT ALDRAGELMR VKQEVSPHLE ISRLTDEQSK SPGGGKALFF EKVKGSRFPV ATNIFGSYRR IHMALGVKNL DELGDRVRQY TEMDPPKSLR QAASLVPRAL QLASFFPRSW GSRTPPCQEV VHTGDDVDLS KIPVLQCWPK DGGPFITLPV VFTQSLVTGR RNVGMYRLQV FDRNTTGMHW HIHKDGSHYF NEYVAAGKPM PVAVAIGTDP ATTYAATAPL PRGIDEMILA GFIRKQPVKM AKCVTVDLEV PALAEFVLEG YVNPGETRIE GPFGDHTGYY SLADHYPVFH VTAITHRKNP VYSATLVGPP PMEDCYLAKA TERLFLPMLQ AVMPEILDYW LPWEGVFHNI VIVSIDKEFP GHAYKLINGL WGQGQMSFCK AIVVVDKNVN PQDGAAVAKR LLTHLDIDTD IVVTKGVLDV LDHSAPDALF GGKIGIDLCD RFTGEPDRKS KGPAPPLPLD MEALLRSGLP ECIACRDPFD GLPGLKDAVV NRIVVLQIDK QRPADQMAET LFEIQQLDMV RVFVLFDRSV DILNNGLMLW KVFNNVSPDR DMVIKKGRMV IDACRKGPVD GHTREWPDEL TFDI
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