Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3110 |
Symbol | |
ID | 5695970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3728062 |
End bp | 3728586 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265727 |
Product | shikimate kinase |
Protein accession | YP_001530990 |
Protein GI | 158523120 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTG TACTGATCGG CTACCGGGGC ACCGGCAAAA GCGAAGTGGG TGCCATACTT TCCCGGCAAC TGGACATGCC CTGTATCGGC ATGGACGCCG AAATCGTCAG ACGGGCCGGG TGTTCCATCC CGGAAATCGT GGTAAAACAG GGATGGCCGG GGTTTCGGGA CGCAGAGGCG GCCCTGGCCC TTGAACTGGC CGGCCGGGAT AACCTGATCA TCGACACCGG CGGCGGTGTG ATTGAACGGC CGGAAAACAT AACGGCCCTC AAGAAAAACG GACAGGTCTT CTGGCTCACC GCTTCCGTCG ACACCATTGT GTCACGCATT CAGACCGACA CCCAGCGGCC TTCCCTGACA GCGGACAAAA GCTTTACCGA CGAGGTGGCC GGGGTGCTGG CCCGCCGGAT CCCCCTCTAC CGGGCCGCGG CCCATCATGA AATCGCCACC GACGGTCTTT CTCCGGCCCG AGTGGCCGAC ACCATTGTCT CCCTGCTGCA AGAAGGCTCC GGCCGGCCGG CATGA
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Protein sequence | MNIVLIGYRG TGKSEVGAIL SRQLDMPCIG MDAEIVRRAG CSIPEIVVKQ GWPGFRDAEA ALALELAGRD NLIIDTGGGV IERPENITAL KKNGQVFWLT ASVDTIVSRI QTDTQRPSLT ADKSFTDEVA GVLARRIPLY RAAAHHEIAT DGLSPARVAD TIVSLLQEGS GRPA
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