Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3036 |
Symbol | nusA |
ID | 5695895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3642574 |
End bp | 3644001 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641265652 |
Product | transcription elongation factor NusA |
Protein accession | YP_001530916 |
Protein GI | 158523046 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00201036 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATAC AGGACGTGAA ACGTGTTGTA GAACAGGTCA GCCGGGACAA GGGCATTGAC AGGGACACTC TTGTGAAGGC CCTTGAAGAG GCCATCAAGT CTGCGGCTCG GAAGCGGTAT GGCGCGGCTA TCGATATCGA AACCATGTAT GATGAGGATA CCGGCGAAAT TGAGATATTC CAGTTCAAGG AGGTGGTTGA AACCGTCCAG GACCCGGATC TGCAGATCAC GTTTGTGGAG GGCAGGGCCC TGGATCCGGA GTGTGAACTG GGAGACAGCC TCGGTGTGAA GATGGACACG CAGTCCTTTG GCCGTATCGC GGCCCAGTCG GCCAAGCAGG TTATTATTCA GAAGATGCGG GAGGCGGAGC GAAGCGCGGT CTACAAGAAT TTCGTGGAAA AAGAGGGTGA GATCATCAAC GGTATCGTCT CCCGCATGGA GCGCGGTAAC GTGATTGTCA ATATCGGCGA GGCCGAGGCG ATTCTTAACT CCCGGGAACA GATTCCCGGC GAAGGCTACC GCCGGGGGGA CAGGGTGCGG GCCAATGTGA TGAAAGTGCT TGAGGAGACC GCCGGCCCCC AGATTATCCT GTCCCGGGCC CATCCGGATT TTGTGGTCAA TCTCTTCAAG ACGGAAGTGC CGGAAATCAG CGAAGGTATC ATTACCATCA AGGCCATTGC CCGGGAGGCC GGCGGGCGGA CCAAGATCGC TGTGGTTTCC AACGACATGG ATATCGACCC GGTGGGTGCC TGCGTGGGGG TCCGGGGCAA CCGGATTCAG AACGTGGTCA AGGAGCTCAA AGGGGAAAAG ATCGATATCG TTCCCTGGAA CCCGGACCCG GCCAAGTTCG TCTGCAACGC GCTTTCTCCG GCAGAGATAG CCCGTGTGAT CATCGACGAG GACAATGCGG CCATGGAGAT CATCGTGCCC GACGAGTCCC ACTCTCTTGC CATCGGCCGA AGAGGGCAGA ATGTGCGGCT TGCCTCCAAG CTGACCGGCT GGCACCTTGA TGTACAGAGC GAGTCCATAT ACACCCAGGC CATGGAACGG GGGTATGACA CGCTTCTTCA GATACCCGGT GTGGATGGGT CCCTGGCAAA TGCGCTGTGT GAAGTCGGGT TTTTCTCGGC GGATGATATT TCCGGTGCCG CGGTTGATGA CCTGATTGAA CTGGAAGGCA TTGATGAAGC CTCGGCAAAG GCGTTGATCC GTGACGCGGT CAAGGTTGCG GAGCAGGCAG CCAGGGAGCA GGCAATCAGG GAGAAAGCAG CCAAAGAGCA GGCAGCCAAA GAACAGGCAG CCAGGGTGCA GGCGGCAGAA GAAGCATCTC CGGCGCCAGA TGAAGAAGCG CCGAATAAAG AGGCGCCGGA TAACGACATT GCGCCAGCCG GAGAGACCCC GGCGGATGAC GGCCATGAGC CGGTATAA
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Protein sequence | MIIQDVKRVV EQVSRDKGID RDTLVKALEE AIKSAARKRY GAAIDIETMY DEDTGEIEIF QFKEVVETVQ DPDLQITFVE GRALDPECEL GDSLGVKMDT QSFGRIAAQS AKQVIIQKMR EAERSAVYKN FVEKEGEIIN GIVSRMERGN VIVNIGEAEA ILNSREQIPG EGYRRGDRVR ANVMKVLEET AGPQIILSRA HPDFVVNLFK TEVPEISEGI ITIKAIAREA GGRTKIAVVS NDMDIDPVGA CVGVRGNRIQ NVVKELKGEK IDIVPWNPDP AKFVCNALSP AEIARVIIDE DNAAMEIIVP DESHSLAIGR RGQNVRLASK LTGWHLDVQS ESIYTQAMER GYDTLLQIPG VDGSLANALC EVGFFSADDI SGAAVDDLIE LEGIDEASAK ALIRDAVKVA EQAAREQAIR EKAAKEQAAK EQAARVQAAE EASPAPDEEA PNKEAPDNDI APAGETPADD GHEPV
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