| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3013 |
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| Symbol | |
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| ID | 5695872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3615549 |
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| End bp | 3618080 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265629 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001530893 |
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| Protein GI | 158523023 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAACGC GACATAATGC GCGACGGTGC CTGGCGGCCG CGGTCCTGGT CCTGGCGCTG
GTGATGCTGT CTGCCGTCCG GGGGAACACC CAGCCGCCGG CGGCGGACCC CGTGGCCGAC
AAGGCTCCGC CCGCCTCTCT GGCGGCCTCC ATAGCGGCGT CTCTGGCCAG TGAAGAGCGC
CTGGTGGAAG CCCTGCAAGC GGAAAAGCGT CAGGCCGACC AGTCGGCTTC TGTTTTTGCG
GACCGGCTGG ACGCCTACCG GACCCAGCAT GCCGTGTATG CCAACATGCT GGCCCTTCAC
ACGGTGTCCG CCACGGACCT GGAGGCGGCC GGCCGTCATG TCCAGTCGTC CCTTGTGGAG
ATTCACGAAC AGCAGGCCCG GGTAAGAAAG AACCTGGAAA CGGTGGAACA GTATCGCTCC
GGCATCAAAG ATCAGGTGGC GGTCAACCAG GCCTACCTGG CGGAACTGAC CGCCGGGTCT
TCTAAGGGCA AGGATGCCGG GACCGTTGAG GCCATTCAAC GGCTGATCGA CCTGGTGAAC
CGGAAACAGG CCCTGCTGGA GGGGCTGCAC CAGATTTATG CCACCCGTCT GACGGACCTG
AAGACCATGG AGGGAATGCT GACCGCCCTT TCGGGAAAAC TGGAAGGCCG GGTCCAGGAA
GCCCGGAAGC GTGATTTTTT TTCCCGGTCC ACAGGGTTTC CGATCCAGGG CGGATGGGAA
GGTCTCCGTC AGGAGATGTC GCAAGTGGCC GATGTGGCAC GGTCCCGGTT CTCCGTTACC
TACCTGGTCG AAGAGGGCCC TCTGCTCTGG CGGTCGCTTC GCCAGGTGCT GGCCTACGGT
GTGCTGCTGG TGCTGCTGGC GGCCATGGGA ATGGCCCGGC TGGCCGCATT CCAGCGGCGG
ATTGATCAGG AAAAGGCGTT TGCGTCCTGT ACCGCGTTTC AGGCGGTTCT TTATATGTTC
TCCCGGTCGA TGTGGCTGCT GCTGATCACG GCACTGTTGT TCCTGTACAT GCAGGCCGGT
GACTATCTAC CTTCTCCGCT GATTGTTTTT ATTTTTTCCC TGGCCCGTAT CTTTCTGGTT
ACCCGGTGGG TGATGGATGC CGTTGACTGT GCCCAAAAGG GCGAAAAACC GCTGGCTCTG
CCGGCCAGGG CGCGTCTTGT CCGCCGGGCA TGCCAGGGTG TGCGGCTGTT CGGCGTCGTA
TACGCGACCT TGCTTTTTCT GGCGCCGGAA GCCGGGGGCC TTCTGTTCTT GACCCGCCTG
CTGTTTGAAA TCGGGGCACT GGTCTTTGCG CTTGTTTTCT GGCGCGGGCG CAAACAGATA
CCGGACCGGG AGGCGGCTTC AGCCGCTTCC GTTAAGCACC GGCTTTCGTT TGGGTGGGCG
GTGAACGTGG TCTGCGTGGG CGGCCTGGCG CTGGAGCTGG CCGGCCACGG GCCCATTGCC
CTTTACTGGT ATATCTCCTG GGGAAGGACA CTGGTCATTG CCCTGTGGGT GGGACTGGTT
TACGCGGCCC TTGGCGAACT GCGCCGCGCT TACCAGGTGG ACCCGGCAGC CAGCAATGAA
ACAGCTGAAG CCCAGGGATC CCCTGTGTGG TGGATACTTA TCCGGCTGGG ACAGGCGGCC
CTGGTGGCGG CAAGCGTGGT GGCCCTGATT GTCGCCTGGG GCGGAGGCCA GGATGCGCTG
ATGGCCATGT TCGGCCTTCT TCATCATCCG TATGAGGTCG GTACCCTCTC TTTCAGGATC
ATCGGTTTTA TTTATGCCGT GGTGGCCCTG TTTATCACCC ACATGATCGC CGGGGCCTGG
CGATACCTGT TTGAGCGCCG GGTCCTTCGG GGCAGCGGCA TGACCCAGGG GGCGCAGGAG
TCGGTGGTCA CCATCACGAT CTACATTGTC TGGGCCGTTG GTATCCTGGC CGCCCTTCAT
GTGGCCGGGT TCAACACCAC CTCCCTGGCC GTGGTCCTGG GCGCCATCGG CATAGGCCTG
GGGTTCGGTC TGCAGAACAT TTTCAACAAC TTTGTCAGCG GCCTGATCCT CCTGTTTGAA
CGGCCCATTC AGGTGGGTGA CGACATCGAG GTGGACGGCA CCTGGGCCAC CGTGAAAAAG
ATCAATGTGC GCGCCACCAT TGTGCAGACC TACGATAACG CTTCTTTGAT CATTCCCAAT
GCCGAGCTGA TCAGCAACCG GGTCATCAAC TGGAGTTTTC AGGACAAGCG GTTGCGCAGA
AAGGTTGCCG TGGGCGTGGC CTACGGCTCC GACGTGGAGC TGGTGCGCAC CACCCTGCTG
GAGGTGGCCG CCGGTATTCC CCGGGTGCTT AAAACACCGA AGCCGGATGT GGTGTTCAAG
GATTTCGGAG ACAGCTCGCT GGTTTTTCTG CTTCGCTTCT GGACCCACGT GGCCTATTTC
TACGCGGTGG AGACCGAGGT CCGGTTCGCC ATTGACCGGC TTTTCCGGGA ACGGGGCATC
ACCATCGCCT TTCCCCAGGT GGATGTGCAC CTTCATAGCG AGACGCCGCC CCCCTCGACC
GACGACGAAT AA
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| Protein sequence | MTTRHNARRC LAAAVLVLAL VMLSAVRGNT QPPAADPVAD KAPPASLAAS IAASLASEER
LVEALQAEKR QADQSASVFA DRLDAYRTQH AVYANMLALH TVSATDLEAA GRHVQSSLVE
IHEQQARVRK NLETVEQYRS GIKDQVAVNQ AYLAELTAGS SKGKDAGTVE AIQRLIDLVN
RKQALLEGLH QIYATRLTDL KTMEGMLTAL SGKLEGRVQE ARKRDFFSRS TGFPIQGGWE
GLRQEMSQVA DVARSRFSVT YLVEEGPLLW RSLRQVLAYG VLLVLLAAMG MARLAAFQRR
IDQEKAFASC TAFQAVLYMF SRSMWLLLIT ALLFLYMQAG DYLPSPLIVF IFSLARIFLV
TRWVMDAVDC AQKGEKPLAL PARARLVRRA CQGVRLFGVV YATLLFLAPE AGGLLFLTRL
LFEIGALVFA LVFWRGRKQI PDREAASAAS VKHRLSFGWA VNVVCVGGLA LELAGHGPIA
LYWYISWGRT LVIALWVGLV YAALGELRRA YQVDPAASNE TAEAQGSPVW WILIRLGQAA
LVAASVVALI VAWGGGQDAL MAMFGLLHHP YEVGTLSFRI IGFIYAVVAL FITHMIAGAW
RYLFERRVLR GSGMTQGAQE SVVTITIYIV WAVGILAALH VAGFNTTSLA VVLGAIGIGL
GFGLQNIFNN FVSGLILLFE RPIQVGDDIE VDGTWATVKK INVRATIVQT YDNASLIIPN
AELISNRVIN WSFQDKRLRR KVAVGVAYGS DVELVRTTLL EVAAGIPRVL KTPKPDVVFK
DFGDSSLVFL LRFWTHVAYF YAVETEVRFA IDRLFRERGI TIAFPQVDVH LHSETPPPST
DDE
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