| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2967 |
|---|
| Symbol | |
|---|
| ID | 5695826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3561158 |
|---|
| End bp | 3561490 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641265583 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530847 |
|---|
| Protein GI | 158522977 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4802] Ferredoxin-thioredoxin reductase, catalytic subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000688679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGG AAAAGCTTTA CGAGCAGCTT CAGTCGGTCC AGGAACCCAA AGGCTATTTT
TTCAACAACG ACCGGGAACT GGTGTTTGAC CTGCTGTCGG CCCTGCTGAC CAACAAGGAG
CGCTACGGTT ACATGTGCTG CCCCTGCCGG CTGGCATCCG GGGACCGGGA AAACGACAGG
GACATTCTCT GCCCCTGCGG CTACCGGGAG GCGGACGTGG CCGAATACGG CAGCTGCTAC
TGCGCCCTTT ATGTTTCAAA AGAGTGGAAC GACGGCGCGG TTGACCGTGT CTATGTGCCG
GAACGGCGGC CCGCGGAAAA GTTTGCGTTC TGA
|
|---|
| Protein sequence | MTPEKLYEQL QSVQEPKGYF FNNDRELVFD LLSALLTNKE RYGYMCCPCR LASGDRENDR
DILCPCGYRE ADVAEYGSCY CALYVSKEWN DGAVDRVYVP ERRPAEKFAF
|
|---|
| |