Gene Dole_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2964 
Symbol 
ID5695823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3558686 
End bp3559357 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID641265580 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001530844 
Protein GI158522974 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0486605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATC AGCAACTTGC GGCCCTGTCG TCGTTCCGGG AAAAATTTCT GGGATTCGAC 
ATCGACGCCA TTGACCGGGA GGCGGACGGC ATGCTGACCG CCGGGGTCAC TGTACGCCAG 
TTTCTCGACA CCTGCATGCC GATTATGGCG GAGGTTGGAG AACGGTTTGA AAAGGGAGAA 
TATTACCTTC CCCATCTGGT GATGGCCGGG GAAATGTTTA AAACCGCCAG CCGCAAGATC 
AAAGGCTCCG TGCAGGCCGG CGAGTCCGGG CCGGCCATTG CCGAAATCGT TCTGGGCACG 
CCCATGGGCG ACATTCACGA CCTGGGAAAG GACATCTTTG GGGTGCTGGC CGAGGCCAGC 
GGCTTTGCCG TTTACAACCT GGGTGTGGAC GTGCCGCCGG AAGCCTTTAT CGCCCGCCTG 
GAAGAGACCG GCGCCGCCTT TCTGGGACTT TCTTCCCTGC TGACCACCAC CTTTGGCACC 
ATTGAGCAGA TCGTGGCCCT GCTGGATAAA AAGGGATTGC GCAAAAACAC GCAGGTCATG 
CTCGGCGGCG GAGCCACGGA ACAGAGCCTG GTGGAAAAGC TGGGCGTGGA TTTTCAGACC 
CGGGACGCCT ATGAGGGCAT CTCCTTTATC AAGCGGCTGA CCGACGGCGA GATGAAAGGA 
GGAAGCGCAT GA
 
Protein sequence
MNDQQLAALS SFREKFLGFD IDAIDREADG MLTAGVTVRQ FLDTCMPIMA EVGERFEKGE 
YYLPHLVMAG EMFKTASRKI KGSVQAGESG PAIAEIVLGT PMGDIHDLGK DIFGVLAEAS 
GFAVYNLGVD VPPEAFIARL EETGAAFLGL SSLLTTTFGT IEQIVALLDK KGLRKNTQVM 
LGGGATEQSL VEKLGVDFQT RDAYEGISFI KRLTDGEMKG GSA