| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2923 |
|---|
| Symbol | |
|---|
| ID | 5695782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3509568 |
|---|
| End bp | 3509930 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641265539 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001530803 |
|---|
| Protein GI | 158522933 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACG TAGTGACACT TGCAGGAAAC ATCGGCAGCG ACATTGAAAA CTTTTTCACA
CCCGACGGCG GCACCCACAT TGCCTCTTTT TCCCTGGCCT TTGCTTCCGG GTTCAAGGAC
GGACAGGAGC AGACCGGCTG GATAAAGGTA AAGTGCTTTT CAAAACTGGC CGACACCGCG
GAAAACTACC TGCACAAAGG CGCAAGAATC GCGGTCTCAG GCTATCTGCA GCAGCAGCGG
TGGGAGACGG AGAACAATGA AAAACGCAGT TCCTACCAGC TGAATGCAAA CAGCATCGAG
TTTATCCGGA TCAATGACAA AGAGGAGGAG CCGGCCGCCG GGACAGATCA GCCACCATTT
TAA
|
|---|
| Protein sequence | MLNVVTLAGN IGSDIENFFT PDGGTHIASF SLAFASGFKD GQEQTGWIKV KCFSKLADTA
ENYLHKGARI AVSGYLQQQR WETENNEKRS SYQLNANSIE FIRINDKEEE PAAGTDQPPF
|
|---|
| |