Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2843 |
Symbol | |
ID | 5695701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3424565 |
End bp | 3425101 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641265458 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_001530723 |
Protein GI | 158522853 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TTGTTATATG CATGAGCGTG ATGGCACTGG TGTGCATGGG GTGCTCCTTG CCCTGCTTTG GCGCTGATGT GGCGAAAATT GGGGTGGTGG ACATTCAGAA GTTTTTCAAG GAGTCCGATA TCGGCAAGGC GGCCAATGCC CAGGTGGAAA AGGAACACGC AAAACTCAAG GCCGATCTGG AAGCGGCGGC CCAGGAGGTC CAGACGCTTG AAGCAGAGCT GGAGCGCGAC GCCATGGTGA TGTCCGAGGA GAAACGCGAG GAAAAGGATC GCGCGTTTCG CATCAAGAAG TACGATTTTC AGGTGCTTCA GCAAAAATAT TCGGAAAATT TAAGAAAGGT CAACCAGGAG ATGCTGCGCA AGCTTGACAC GAAACTCACC AGGCTGACCC AGGAGTTCGG CACCAAGGAA GGGCTGCTGT TGATGGTCGA AAAGGGGTAC ACCATGTATT ATCCCAGTGC CATTGATGTC ACCGACAAGC TGATCGTGTT TGCCAATTCC AAAAAATTGA CCCTGGACGG GGAGTAA
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Protein sequence | MKKFVICMSV MALVCMGCSL PCFGADVAKI GVVDIQKFFK ESDIGKAANA QVEKEHAKLK ADLEAAAQEV QTLEAELERD AMVMSEEKRE EKDRAFRIKK YDFQVLQQKY SENLRKVNQE MLRKLDTKLT RLTQEFGTKE GLLLMVEKGY TMYYPSAIDV TDKLIVFANS KKLTLDGE
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