Gene Dole_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2800 
Symbol 
ID5695657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3378320 
End bp3379390 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID641265414 
ProductGTPase EngC 
Protein accessionYP_001530680 
Protein GI158522810 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC GATACCCTGA TCTGGCCCCT CTGGGCTGGA ATGAGTGGTT TGAAGAGAGG 
GCCGCCGAAT GCCGGCCCGG GGATACCATT GCCCGGGTTG TGGCGGTGGA CCGTGATCTG
CTGCTGGTCA TGGACCCGGC CGGCACTTTT CGGGCAAAGA CGGCGGGCAG TTATCTGTTT
CGCCACCATC TGGTCCAGGA ACTGCCCTGC GTGGGGGACT GGGTGTGCGT TGAAAAAGAC
CCGGCCGGCG AACTGGGCCG GGTGCGCGCG GTCCTGGAGC GAAAAAGCGC GCTGCGCCGC
AGGGCCGCCG GGGATGTCGT GGACTACCAG ATGATCGCGG CAAACGTGGA CTGCGTGATT
ATCGTCCAGT CCTGCCATTT TGATTTTAAC GTAAACCGGC TGGAGCGGTA CCTTGTCATG
GTAAAAGACG GCGGGGCCGA GCCCTGGATT CTTCTGACCA AGACGGACCT GGTCGGGCCG
GAGGTGCTGG CATCCCAGGT GGCGCAAATT CGGGCCGCCG GGGTGACGGC GCCGGTGCTG
ACCCTGAGCA ATGTCACGGG CCGGGGCATG GCCGATCTTA AACAAATACT GGCGCCGGCA
CAGACCTACT GCTTTGTCGG GTCTTCCGGG GTGGGCAAAA GCACGATGAT CAATCACCTG
CTCGGACGGG AACTGCTTGA GACCAGGGGT GTCAGCGGCA CCGGCGAGGG CCGGCACACC
ACCGTACGCC GGGAACTGCT GCTGCTTGAA GGCGGGGCCC TGGTCATCGA CAACCCGGGC
ATGCGCGAGT TCGGCCTTCT GGGGGCCGAA AGCGGAATGG AAGAGAACTT TTCAGACATT
ACCGGGCTTG GAACCGGGTG CCGCTACGGC AACTGCACCC ACACCGCCGA ACCCGGCTGC
GCCGTGCTTG AGGCGGTAAA TTCAGGCGCA ATCAGCCGCG CCCACTATGA CAATTACATC
AAGCTGCGGC AGGAGTCGGC GTTCTACCAG ATGTCCTATG TTGAGAAGAG AAAAAAAGAC
CGCAACTTTG GAAAATATGT TAAATCCGTC AAGAAACAGC TAAAAAAATA G
 
Protein sequence
MKIRYPDLAP LGWNEWFEER AAECRPGDTI ARVVAVDRDL LLVMDPAGTF RAKTAGSYLF 
RHHLVQELPC VGDWVCVEKD PAGELGRVRA VLERKSALRR RAAGDVVDYQ MIAANVDCVI
IVQSCHFDFN VNRLERYLVM VKDGGAEPWI LLTKTDLVGP EVLASQVAQI RAAGVTAPVL
TLSNVTGRGM ADLKQILAPA QTYCFVGSSG VGKSTMINHL LGRELLETRG VSGTGEGRHT
TVRRELLLLE GGALVIDNPG MREFGLLGAE SGMEENFSDI TGLGTGCRYG NCTHTAEPGC
AVLEAVNSGA ISRAHYDNYI KLRQESAFYQ MSYVEKRKKD RNFGKYVKSV KKQLKK