| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2415 |
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| Symbol | |
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| ID | 5695263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2910233 |
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| End bp | 2912293 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641265021 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530296 |
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| Protein GI | 158522426 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGATGA AGACCATCCA CCAAAAACGG TTGTGGCCCG CGGCGCTTGC CATGGCAGTG
CTTGCCGCCC TGACCCTGGG GGTTTACCAT GACATCGGCA GTCACGCGTT TATAGAATTT
GACGACAGTT TTTTTGTGGA GGCCCCCCAT GTTCAGAATG GCCTGACACT GGATGGCCTG
AAACAGTCCT TTACCACCCG GGAGGGCATG TGGTTCCCGC TCACCTGGAT TTCTCACATG
GCGGATGTTC ATTTTTACGG CAACGATCCG GCCGGCCACC ATTATACCAA CCTGTTTTTA
CATCTGGTCA ACACACTCCT GCTGTTTCTC GTTCTGTGGC GCATGACCGG TTCCCTGGGA
TCGGCCCTGG CGGTGGCAGC CCTGTTTGCC GTTCATCCCC TGAACACAGA AACGGTTTCC
TATATTGCAT GCCGCAAGGG TTTGCTGTCC ACGCTTTTCT GGATACTGGC CATGGGCGCC
TATACACAAT ATGCCCGATC ACCGTCTGTG GGACGATACC TGGTGGTGAC GGTCCTGCTG
GTTCTGGGCA TGATGGCCAA GCCCATGCTA ATCTCCCTGC CGGTTATTCT GCTGCTGCTG
GATTTCTGGC CCCTGGGCCG GTTGTCAAAG GGGCGGGTCT GGGACCTTGT TAAAGAAAAG
ATGCCGCTGC TGGCCATCAG CCTGGTGTTT CTGGGGATCA CGGTTTCCGT CCAGCAGCAG
ACCGGCGCCA TAACCTCCCT GGCGGAACTG CCGGTTTTTC TGCGGATTCA AAACGCGCTG
GTCTCTTACG TGCTGTATAT CGGAAAGATG CTCTGGCCGG TTTCCCTGGC CGTGTTTTAC
CCCTTTCCCA AGGCAATCCC CCTGTGGCAG TGGGCCGGAT CAGCCACCCT TCTGGTTCTG
ATCACGACCG TCTCCTGGCG GGCACGGACC AGGGCGCCCC ATCTGATTGT GGGCTGGGTC
TGGTACCTTG TGACCCTGGT GCCGGTCATC GGCCTGGTAA AGGTGGGCCA GCACGCCATG
GCCGACCGTT ATGCCTACAT TCCCTTAATC GGCCTGTTTG TGGCCATTGC CTGGCACCTG
GCCGGTTATG CGGCGGCCCG GCCAGGCCGG CGATTTGTGG TGTGGGGCCT GGCAGCGTCC
GCCGTGGCGG TTTTGGGTGT AATGTCGTTC CGGCAAACCG GGCACTGGAA AAACAGTACC
ACGCTTTTTG AGCATACCCT TGCCGTGACC GAAAATAACG ACCTGATTCA CAACAACCTG
GGAAAAGTCT GTTTTGAAAG GAAAAACTAT GCCTGCGCCC ATGAGCAGAT CACCGAGGCC
TTGCGTATCA ATCCCTATCT TCCCCAGGCC AACTACAACA TGGGCCTGCT GCTGATCAAG
GGGGGAGATA CGGACCGGGC GGTGCCTTAT TTTTCCCGGG CACTGGAGGT GAAACCCGAT
TTTTTTGACG CGCGATATGC CCTGGCCAAT GTTTTTTTTA ATAAGAATGA TTTTGAAAAC
GCGCTGAACC ATTATATCCG TATTTTGAAG GACCGGGAAA CCGCGCCGGC CGGGCTGCTG
GCCGACACCC ATAACGACAT GGGGGTCATC TATGCCCACC GCAAGAAAAT AGACGTGGCT
GAAAGCCATT TCCTGGAGGC CCTGTCCCTG AATCCCGGCC TGGCAGCGGC TCACAACAAC
CTGGGCCTGC TGCTCTCTTC CCGGGGGGAG ACCGGCAGGG CCGAGGATCA TTTTCGCAGC
GCCATGGCAC TGACCCCCGG GTTCCTGGAC GCGGCCAACA ACCTTGTGGC GTTGTACCGG
ACACAGGAAA AGTATGCCGA AGCTGCCGGC CTTTTGGAAC GGCTGCTGGC CGAGCGGCCG
GACAGCGCGG CCAGCATCGC GTACAACATC GCCTGCCTTT ATGCCGTTCA GAACGACAGG
ACGGCGGCGA TAATGTGGCT GGAGAGGGCC CTCAGCAGCG GGTTTGACCT GTGGCCCCTG
CTGGAACGGG ATGTCGACCT TGAGAACATC CGGGACACTG AATATTATAA GAATCTCATG
GCGGGCCGTG GCGACCGTTA A
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| Protein sequence | MAMKTIHQKR LWPAALAMAV LAALTLGVYH DIGSHAFIEF DDSFFVEAPH VQNGLTLDGL
KQSFTTREGM WFPLTWISHM ADVHFYGNDP AGHHYTNLFL HLVNTLLLFL VLWRMTGSLG
SALAVAALFA VHPLNTETVS YIACRKGLLS TLFWILAMGA YTQYARSPSV GRYLVVTVLL
VLGMMAKPML ISLPVILLLL DFWPLGRLSK GRVWDLVKEK MPLLAISLVF LGITVSVQQQ
TGAITSLAEL PVFLRIQNAL VSYVLYIGKM LWPVSLAVFY PFPKAIPLWQ WAGSATLLVL
ITTVSWRART RAPHLIVGWV WYLVTLVPVI GLVKVGQHAM ADRYAYIPLI GLFVAIAWHL
AGYAAARPGR RFVVWGLAAS AVAVLGVMSF RQTGHWKNST TLFEHTLAVT ENNDLIHNNL
GKVCFERKNY ACAHEQITEA LRINPYLPQA NYNMGLLLIK GGDTDRAVPY FSRALEVKPD
FFDARYALAN VFFNKNDFEN ALNHYIRILK DRETAPAGLL ADTHNDMGVI YAHRKKIDVA
ESHFLEALSL NPGLAAAHNN LGLLLSSRGE TGRAEDHFRS AMALTPGFLD AANNLVALYR
TQEKYAEAAG LLERLLAERP DSAASIAYNI ACLYAVQNDR TAAIMWLERA LSSGFDLWPL
LERDVDLENI RDTEYYKNLM AGRGDR
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