Gene Dole_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2301 
Symbol 
ID5695149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2789567 
End bp2790580 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID641264907 
Producthypothetical protein 
Protein accessionYP_001530182 
Protein GI158522312 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.100288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC GAGTTTTTAT TGCCGGGATT TGTCTGGTTT TGCTTTCAAC CATTGTCGTG 
GCGTCAGAAG GCGATTTTTA CCGGGGTAAA ACCATGGACC TGGTGGTGGG ATACGGTCCG
GGCGGCGGAT TTGACACCCT GGCCCGGCTG ATCGCGCCGG AGATCGAAAA GCGGACCGGC
GCCACCGTGG TGGTGAGAAA CCTGCCCGGC GGCGGCGGGG CCGTGGCCCT CAACCAGGTG
GCCAACGGTA AGCCCGACGG GCTGACCCTG ATGCTGGTCA ACGGCCAGGC GGCCGCGCTG
GCCCAATTAA TGTCGCAGGA AGCGGTGCGG TACGACCTGA CCACCACACC CACCATCGGC
CTGGTCTGTC CCGAACCGTC AGTGGTGCTG GTCGGGAAAG ATTCGCCGTA CAAAAGCATC
GACGGCATGC TGCATGCAAA GCAGCCGGTC AAGTGGGCCG CCGGCAGTAA AATCGACAAC
ATGGCCGACG TGGAGGCCTG TTTTTCTGAA GCGCTGGGGC TCAACTCCAG AATCATCATC
GGCTACAAGG GCAGCAATGA AGCGGCCCTT TCCACCATGC GGGGAGAAAC CGATGCCATT
GCCATCAGCG CAACGTCAGG GAAAAAGTTT TCTCAGGACG GCCGGCTGGT GCCCCTGGCG
ATCCTGGCCA GGCAGCGCAG CAGTGTACTG CCCGACGTGC CCACTATTTT TGAAGTGGTG
GAACTCGACG ATGCCCATGC CTGGTGGATT GACTTTCGGG CGGGCATTTC CGATATCGGG
CGGTACCTGG TCACTACGCC GGGTACGCCG CCGCAAAGGG TGGACTACCT GGTGTCTGTT
GTAAAAGAGA TCCTGACAGA CCCGGCGTTT ATCGAGTTTG TAAAATCCAA GAAGGCACTG
ATTGAATACG CCGAGGTGTC GCAGACCGAC CGCTTGATCG AAAAGACGTT AAAGTCATTG
GATAAAGACC GGATGGAGCG GGTCCGGCAT GTGCTGCTTG AGAAATACTA CTAA
 
Protein sequence
MKLRVFIAGI CLVLLSTIVV ASEGDFYRGK TMDLVVGYGP GGGFDTLARL IAPEIEKRTG 
ATVVVRNLPG GGGAVALNQV ANGKPDGLTL MLVNGQAAAL AQLMSQEAVR YDLTTTPTIG
LVCPEPSVVL VGKDSPYKSI DGMLHAKQPV KWAAGSKIDN MADVEACFSE ALGLNSRIII
GYKGSNEAAL STMRGETDAI AISATSGKKF SQDGRLVPLA ILARQRSSVL PDVPTIFEVV
ELDDAHAWWI DFRAGISDIG RYLVTTPGTP PQRVDYLVSV VKEILTDPAF IEFVKSKKAL
IEYAEVSQTD RLIEKTLKSL DKDRMERVRH VLLEKYY