Gene Dole_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2189 
Symbol 
ID5695035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2660852 
End bp2661520 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID641264793 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530070 
Protein GI158522200 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCCG CAACCGGTAC GCATCACGAC GTTCCCACCC AGGTCAAGGA CCCGGCCCTG 
GTGGAAAGAA GGCGGCGGCA GATCGTGGAC GCTTCCGTGG CCCTGTTTGT AAAAAACGGG 
TACCACAACA CCACCACCCG CCAGATCGCC AAAGCCACCG GGTTTTCCAT CGGCAGCCTG 
TATGAGTATG TCTCCACCAA GGAGGATGTG CTTTACCTGG TGTGCGACGC CATTCACGCG 
GAGATGGAGA AGGCCGTGAC CCGGGTGGTA TCGGACCAGG TGCCCGGACC GGATATGCTG 
CGGGACGCGG TGCGCGGTTA TTTTGCCGTG TGCGACACCA TGAGCGACCA CATTGTGCTG 
ATCTACCAGG TGACCCAGTT TCTTTCAGAC AAGTGGAAAA AAAGGGTGCT GGACAATGAA 
ATCCGGGTCA CCGGCCGTTT CCGGCAACTG CTGGAAGACG TGATCGCCAA GGAGCAGTTT 
GTCGGCATCG ACGCCCGGCA GATTGATCTG GCGGCCCACA ACATCGCTGT GCTGGGCCAT 
GCCTGGGCTT TTCGCCGCTG GTTTTACCTG AAGCACTACT CTCTTGCCGA GTACACCGAG 
TTTCAGATTC GAAATATTCT GGGCGCGATT TCCGAAAATT TTCACAATTC CATCAACAAG 
GGGAAATAA
 
Protein sequence
MKAATGTHHD VPTQVKDPAL VERRRRQIVD ASVALFVKNG YHNTTTRQIA KATGFSIGSL 
YEYVSTKEDV LYLVCDAIHA EMEKAVTRVV SDQVPGPDML RDAVRGYFAV CDTMSDHIVL 
IYQVTQFLSD KWKKRVLDNE IRVTGRFRQL LEDVIAKEQF VGIDARQIDL AAHNIAVLGH 
AWAFRRWFYL KHYSLAEYTE FQIRNILGAI SENFHNSINK GK