Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2108 |
Symbol | |
ID | 5694951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2561118 |
End bp | 2562119 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264709 |
Product | ribonuclease Z |
Protein accession | YP_001529989 |
Protein GI | 158522119 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000254019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACCGA CCTTCCACCC CTTTCTGGTC AACCACCCGT TTGACGATCC CTGCCTCTTT ATCAATTTTC TTTTTGAAAA CAGGGCACTG GCCTTTGACC TGGGCGAAAT CAACAACCTG GCGCCCCGGG ACATTCTGAA GCTGACCCAC ATCTTTGTCT CCCACACCCA TATCGACCAT TTTGCCGGAT TTGACCGTTT TCTTCGCCTG GCCCTGGGCC GGGACAGGAA GGTTCACCTG TTCGGCCCAG AAAACTTTCT GAGCAATATC AGCGGCAAAC TCGGGGCCTA CACATGGAAC CTCACCGACC GCTATGAAAA AAGCCTTCGC CTGCAGGTGA CGGAAGTAAC ATCCCGGGGC ATGCGGACCC AGTGGTATCG ATGTCAGGAC CGGTTCGCGC CCACGGCACC GCCCCGGTCC TCGCCCTGGA CCGGCACCCT GCTGGAGGCG CCGGGGTTTA CCATCTCCGC CGTCATTCTG GACCACGGCA CCCCCTGCCT GGGGTTCTGC CTGAAAGAGC GGTTTCACAT CAACATCAAA AAAGAGGCGC TGACCGCGCG GGGACTGGAA CCGGGGCCAT GGCTTCAATC CTTTAAAAAG GCCCTGTATG AACAGGCTCC ACCGAACACA TCAATTACTG TTCCCGCGGG AGACACGCTT CAGGCGTTTG GACTGGCGGC CCTGGCACAG GATATCGCCC TTATCACACC AGGTCAGAAA ATCGTCTACA TCACCGACGT GGCCTTTTCT CCGGATAACG TCGAACGCAT CATGGCCTTT GCCCGAAACG CGGACCACCT CTTTATCGAG GCCTATTTTC TGGATGCGGA CCGGGAAGCG GCCCGTGAGA AAAAACACCT GACCGCGGCC CAGGCCGGGG AACTGGCCGG CCGGTCCGGG GCCAGACGGT TTTCCGTCTT TCACGTTTCG CCCCGGTACA TGGACAGGCT GCCCGAAATC GAGCAGGAGG CCCGGCAGGC TTATGACAGG TTCAGAACAT GA
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Protein sequence | MRPTFHPFLV NHPFDDPCLF INFLFENRAL AFDLGEINNL APRDILKLTH IFVSHTHIDH FAGFDRFLRL ALGRDRKVHL FGPENFLSNI SGKLGAYTWN LTDRYEKSLR LQVTEVTSRG MRTQWYRCQD RFAPTAPPRS SPWTGTLLEA PGFTISAVIL DHGTPCLGFC LKERFHINIK KEALTARGLE PGPWLQSFKK ALYEQAPPNT SITVPAGDTL QAFGLAALAQ DIALITPGQK IVYITDVAFS PDNVERIMAF ARNADHLFIE AYFLDADREA AREKKHLTAA QAGELAGRSG ARRFSVFHVS PRYMDRLPEI EQEARQAYDR FRT
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