| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2055 |
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| Symbol | |
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| ID | 5694898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2505311 |
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| End bp | 2506078 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641264656 |
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| Product | DNA uptake lipoprotein-like protein |
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| Protein accession | YP_001529936 |
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| Protein GI | 158522066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000188643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATGG TGTCGCCCCG GATTCCTGTT GACATGCCGG CTGCCATGTC TTATGTTGCA
ACCTCAACCG ACAACCACCG AAGGCGATTT TACATGAAAC AACTGGCTGT AATCCTCTCT
GCCCTTCTGA TGATCTGCGC CATGGCCGGA TGCGCGCACA AACCGGTCCA GGAAAAGAGC
GCCCAGGAAC TGGCCGATGA AGGCACGCGG TACTTTGACA AGGGCCGCTA TAAAAAATCG
ATTGAGGCCT TTGAGAACCT GAGAGACTGG TATCCCTTCA GCAAGCTGAC CACCCTGGCG
GACCTGAAGG TTGCCGATGC CTACTTCAAC ATGGAAGAGT ATGAAAGCGC GGTATCGGCC
TATGAAAACT TTGAACGCCT TCACCCGCGC CACGAATCGG TTCCGTTTGT TATTTTCCGT
ACCGGCCTGT GTCATTTCAA CCGGCTGGAC ACCATCGACC GGGACCAGAC CCCGGCCCAC
CGGGCCATTG ATGCCTTCAG CCGGCTGGTG CGGGCATACC CGGACAGTGA ATACGCCTCC
CAGGCAACGG ACTACATTCA CCAATGCCGG GAAAGCCTGG CGGCCCATGA GCTGTACGTG
GCAAAATTCT ATTTCAAAAC CAAACGCTAC CGGTCGGCCC TCTACCGCTT TAAGCAAATT
ATTGAAAAAT ACCCGGACGT TGGTGACATT GAAACGGCCC GGCGCCACAT TCCTTTGTGC
GAAGAAGGGC TGGCCGAAAT GGAAAAAGAA GAATCGAAAA ACGATTAA
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| Protein sequence | MIMVSPRIPV DMPAAMSYVA TSTDNHRRRF YMKQLAVILS ALLMICAMAG CAHKPVQEKS
AQELADEGTR YFDKGRYKKS IEAFENLRDW YPFSKLTTLA DLKVADAYFN MEEYESAVSA
YENFERLHPR HESVPFVIFR TGLCHFNRLD TIDRDQTPAH RAIDAFSRLV RAYPDSEYAS
QATDYIHQCR ESLAAHELYV AKFYFKTKRY RSALYRFKQI IEKYPDVGDI ETARRHIPLC
EEGLAEMEKE ESKND
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