| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2026 |
|---|
| Symbol | |
|---|
| ID | 5694866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2455026 |
|---|
| End bp | 2456732 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641264624 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001529907 |
|---|
| Protein GI | 158522037 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00491297 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAA AAAATTCAAC GGAAGACCTT GACGTCAGTC GACTGTCCGC AGACAAAAAG
CTCGGCCACC TGCTGGAGAG TGTCGTCCGT GAAGTGAAAC TTTATGCCGA AGGGCAGATT
GAACACATTC AGAAACTGGC CCAGATCGGC CTGGCCCTGT CCGGCCAGAA AAATCTCAAC
ACCCTGCTCG AGATGATCGT GGACGAGGCC CGGAAACTTT CCAGCGCCGA TGCCGGCACC
CTGTACATCG TGGAGCAGAA AAGCCGGTCC CTCCGGTTTG CCATTCTTCA AAACGACTCC
ATGAACATTC GAAAGGGCGG CGCAGGCGGC GACCTTTCCG ATGAAATGCC CAACGTTCCC
CTGGCCGACG AACAGGGCAA CCCCAACCAT GCCAATGTTT CCTCCTATGT GGCCCTGACC
GGGGAAAGCG TCAACATCGA AGATGTGTAT GAAGCCGGGG CGTTCGATTT TTCCGGCACC
AAGCGGTATG ACGCCGCCAC CGGCTACCGC TGCAAATCCA TGCTGGTCAT GCCGTTAAAA
AACCACGAGG ACAAGATTAT CGGCGTGTTG CAGCTGTTAA ACGCCAAGGA CCCCCAGACC
GGGGAAATCA TGAAGTTCCA TGCGGACATC GTGGGGCTGG TCGCTTCCCT GGCCTCCCAG
GCGGCCATCG CGCTGACCAA CACCCAGTTG ATCGAAGATC TCAAAGCTCT TTTCTACGCA
TTTATCAAAA GCATTGCCAC GGCCATTGAT GCCAAATCCC CTTTTACCGG GGGGCACATC
AACCGGGTGG TAAGCCTGAC CATGGATGTT GCCGAAGCGA TTCACGGCAC CAACACCGGT
CCTTTTGGAG AGATGCGCTT CACCGATGAC GAAATGGAAG AACTGCGCAT TGCCGCGTGG
ATGCATGACG TGGGCAAAAT CACCACGCCG GAGCATATTG TCAGCAAGAC CAACAAACTC
GAAGGCGTCT TTGATCGGAT TCACCTGATC GAAACACGGT TTCTGCTGAT CCTTCAGCTG
ATGGAAAACC GCCACCTGCG TGTCAAGATC GACCTCCTCA AAACCGACAA CAGTCCGGCG
GCCCTTAAAA AAATGGAGGC CATGGACCGC GAACTCCAGG CCCGGAAAGC GGAGATACTG
GAAAGCCTGG AACTTTTAAA GGCCGTAAAC ACGAACAAAG GCATGGTGGA TGAACGTGCG
GTAAAGCAGG TCCGAGAGAT TGCGGCCCGC ACCTACCATA TCGGCGGCAA CGCCTACCCC
TGGTTGTCTG AGAACGAGGC TGCCTGCCTG AGCATTCTCA AGGGCAACCT GCTGGACGAG
GAACGGCGGC TGGTGGAGCA GCATGCGGAG ATGACCATCA ACATCACCAG GGAACTCCCC
TTTCCGGACC GTTTTTCCCA CGTTCCCGAA TATGCCGGGG CCCATCACGA AAAGCTGGAC
GGTTCCGGAT ATCCTCTGGG ACTTACCGGT GACCAGATTC CCCTGCAGGC CAGGATCATC
GCCATTGCGG ATGTCTTCGA GGCCCTGACC GCGCCGGACC GGCCCTACAA ACGGCCCATG
CACATTTCAC AGGCATTGAA AATTCTTCAG GAGATGGCGG CGGCCGGCCA CATCGACGGG
GATATCGTCA GGATGTTTAT CAAACAAAAA GTTTACCAGG CATACGCGGA CAAAGAACTT
ACACCGGAGC AGCTCTCCAC TGCATAA
|
|---|
| Protein sequence | MTQKNSTEDL DVSRLSADKK LGHLLESVVR EVKLYAEGQI EHIQKLAQIG LALSGQKNLN
TLLEMIVDEA RKLSSADAGT LYIVEQKSRS LRFAILQNDS MNIRKGGAGG DLSDEMPNVP
LADEQGNPNH ANVSSYVALT GESVNIEDVY EAGAFDFSGT KRYDAATGYR CKSMLVMPLK
NHEDKIIGVL QLLNAKDPQT GEIMKFHADI VGLVASLASQ AAIALTNTQL IEDLKALFYA
FIKSIATAID AKSPFTGGHI NRVVSLTMDV AEAIHGTNTG PFGEMRFTDD EMEELRIAAW
MHDVGKITTP EHIVSKTNKL EGVFDRIHLI ETRFLLILQL MENRHLRVKI DLLKTDNSPA
ALKKMEAMDR ELQARKAEIL ESLELLKAVN TNKGMVDERA VKQVREIAAR TYHIGGNAYP
WLSENEAACL SILKGNLLDE ERRLVEQHAE MTINITRELP FPDRFSHVPE YAGAHHEKLD
GSGYPLGLTG DQIPLQARII AIADVFEALT APDRPYKRPM HISQALKILQ EMAAAGHIDG
DIVRMFIKQK VYQAYADKEL TPEQLSTA
|
|---|
| |