Gene Dole_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1941 
Symbol 
ID5694781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2345450 
End bp2347726 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content56% 
IMG OID641264539 
Producthypothetical protein 
Protein accessionYP_001529822 
Protein GI158521952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC ATTATTTAAA GAAAATGTCT GCGCAAAAAG ACGGTATTGT CTCTGAACAG 
GTGGTTTCGC ATGGCATGCT GAAAGCGAGT GCCGTGGCGG CTTCCGTGGC CGGATGCGTG
TTTCTGGCCT CTCCTGCCCA CCAGGCACTG GCCGCACCCG GCCCTTTTCT CCCCCACGGA
ATTGAGGGCA ATCCCCTGCC CATGCCCGTG AGCGCTTCCT GGTGGAGCCG GCCGGCCCTT
GCTGACATCG ACGCTGATGG TGACGTCGAT ATTTTCGTGG GCGACAAGAC GGGCACCATT
AACTATTTTG AAAATATCGG CACTGCCTCG GCTCCGGCCT TTGAAATGCG CACCGGCGCG
GACAGCCCCT TCTGGTATTA CGACACCGGG TGTGGGACCT ATTATCCATA CATTGTGGAT
GCACTTGCGG CACCCACTTT TGCGGACCTT AATGGCGACG GGGACCTGGA CGCCGGCGTG
GGCAACAGTT ACGGATCGAT TGACTACTTT GAAAACACCG GCACTGTCTC GACCCCGTGC
TTTGTAATGC GCACCGGTGC GAAAAGCCCC TTCTGGTATT ATAACAAAGG GGATAGAACC
TATTATCCAA CAAAATATAC GGATACGGGT TCGACACCGG CTTTTGCAGA CCTTGATGGC
GACGGCGACT TCGACCTCTT TGTGGGCTCC TTCATAAGCT TCCTCAGCAC GCCGATGCGG
TATTTTGAAA ACACCGGCAC AGTCACCGCA GCCAGGTTCG CGGAGACGGA TGGCCCGCTT
GACGCCCTGA CCGATGCGTT ATCGAGCCCT GCAGCCGCCT TTGCCGACAT TGACGGTGAT
GGAGACCTGG ACGCTTTCAT GGGCATCAAA TACCAGTCCT ACGAGACATT CGTTGGCGTA
CTCGGTACGG TTCTTTCCCC AATCAGCGGC ATCACCTGTT TTGAAAACAC CGGTGACGCC
TCGGCCCCAC ACTTCACAGA CAACAGTACG GGCAATCCTT TTACCGGGCT TGAAACCGAC
CCGTGGAGTG CTCCGGCCTT TGCCGACATT GACAGTGATG GCGATCTGGA CGCCTTTGTG
GGCGGTATGT CCGGTGACCT GAAATTCTTT GAAAATACTG GAACTACAAG CGCCCCGGTC
ATGACAGAAC GCCGGACCGT CAACAGCCCG GCATGGGGTG TGGATGTGGG TAAATACAGC
CATCCCGTTT TTGTGGATAT TGACGGGGAC GGCGACCTGG ACGCCTTTGT GGGTGAATTT
GGTACTATAA AAGGTGCTTT TAAGTATGAT GGTGACTCTT TCATGGGCCT GGGCCTGCGG
CCTGCGGTCT ATGGCAACGT TAACTTTTTT GAAAACACCG GAACCGCCCA GAGCCCTCAT
TTTGTGCAGC GCGCGGACGC GGACTACGGC CTGGGCGAAG GCGTGATGAG CCCACTTGTC
GTTTTCACCA CCCCGGCTTT TGTGGATATT GATGGCGACG GTGACATGGA CGCCTTTATG
GGGGCCAGGT ACGGCTTTGA CCTGGACGTG GAGCTAGCAG AAGAAACGCC GGATGTTGTC
TCGGTATCCG ATATATCGGA CCCGTCCGTG TTTATTCAGT ATTTTCAAAA CGTCGGTACG
CCAACGGCTC CCTATTTTGC CCCTATGCCC TCTCAACAAA ACCCGGCAGC CACTATCGGG
GGAACGGCGT TCGATGATTA CAAACCCGCC TTTATGGATG CTGACGGCGA CGGCGATTTT
GATCTGTTTA TCGGAGATAG AGACGGCGAT ATCTATTACT TTGAGAACAC CGGGACCGCC
AATGCGGCCG AGTTTAACGC CGCGCTTCCG GAGTACGAGG CCAACCCCTT TGGCCTGACC
GCGGTAGATC ACAACGCAAC CCCCACCTTT GCCGACACTG ATGGGGATGG CGACATGGAC
GCCGTTGTGG GCGAGTATCA CAGCGCCATT CACTACTTTG AGAACACCGC TGACGCCACC
GCCACCGAAC CGATCTTTGT GGAACGCACC GGCACGGACA ACCCTTTTGG CATCTATGGC
GACGAGGATG GCGCTTATCT TTTTACCTCG CCGGCCTTTG CCGACATCGA CAGCGACGGA
GACCAGGATC TGTTTGTGGG TGAATGGGGC GGCAGAATCC TCTTCCTGGA AAACCGGGAA
ATTGTTCCGG TGGTGCCGCC GGTGGAGGAG GATGATGATG ACGATGATGG TAAAGGCAAT
AACACCTTTG TGATTCCATC CGCTGAGGGC TGTTTTATCA ACAGTATTGG CGGCTGA
 
Protein sequence
MATHYLKKMS AQKDGIVSEQ VVSHGMLKAS AVAASVAGCV FLASPAHQAL AAPGPFLPHG 
IEGNPLPMPV SASWWSRPAL ADIDADGDVD IFVGDKTGTI NYFENIGTAS APAFEMRTGA
DSPFWYYDTG CGTYYPYIVD ALAAPTFADL NGDGDLDAGV GNSYGSIDYF ENTGTVSTPC
FVMRTGAKSP FWYYNKGDRT YYPTKYTDTG STPAFADLDG DGDFDLFVGS FISFLSTPMR
YFENTGTVTA ARFAETDGPL DALTDALSSP AAAFADIDGD GDLDAFMGIK YQSYETFVGV
LGTVLSPISG ITCFENTGDA SAPHFTDNST GNPFTGLETD PWSAPAFADI DSDGDLDAFV
GGMSGDLKFF ENTGTTSAPV MTERRTVNSP AWGVDVGKYS HPVFVDIDGD GDLDAFVGEF
GTIKGAFKYD GDSFMGLGLR PAVYGNVNFF ENTGTAQSPH FVQRADADYG LGEGVMSPLV
VFTTPAFVDI DGDGDMDAFM GARYGFDLDV ELAEETPDVV SVSDISDPSV FIQYFQNVGT
PTAPYFAPMP SQQNPAATIG GTAFDDYKPA FMDADGDGDF DLFIGDRDGD IYYFENTGTA
NAAEFNAALP EYEANPFGLT AVDHNATPTF ADTDGDGDMD AVVGEYHSAI HYFENTADAT
ATEPIFVERT GTDNPFGIYG DEDGAYLFTS PAFADIDSDG DQDLFVGEWG GRILFLENRE
IVPVVPPVEE DDDDDDGKGN NTFVIPSAEG CFINSIGG