Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1930 |
Symbol | |
ID | 5694770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2330942 |
End bp | 2331643 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641264528 |
Product | two component transcriptional regulator |
Protein accession | YP_001529811 |
Protein GI | 158521941 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.465475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG AAAAAATCCT GATCGTGGAT GATGAAAAAG ACATCCTCGA GCTGCTTCGG CTCAGCCTGG AACGGGACGG CTACCAGGTG GCGTGCGCGG AATCCGGGGA AAAGGCCCTG GAAATTGTTT TATCCGGCCG GCCGGACCTG GTGGTGCTGG ACCTGATGCT GCCGGGCATC GACGGTCTTG AAGTGGCCAG GGCGATTCGA AACGACGACC GGATACAGGG GACCCCGATT TTGATGCTGT CGGCAAAAGG GGAAGAGTCG GACATTATCA CCGGCCTTGA ACTGGGGGCT GACGACTACA TCACCAAGCC CTTTTCCCCG AAAATACTGA TTGCCCGCAT TCGCTCTGTT TTACGAAGGC AGCAGGCAAA AGCCGCGCCA CCGGACCCCG GCCGGACCAT CGCCGTTTCC GGCATCACCA TCCATCCCCG GAAACACACC GTGGAAGTGA ATGGGAAAAA AATTGACCTG ACCCCGTCGG AATTTGATAT CCTGTCTTTT CTTGCTTCCC GGCCCGGGCT GGTGTTCACC CGATGGCAGA TCGTGGACAA GATCCGTGGA GAGCACTACG CCGTCACCGA CAGAAGCGTG GATGTACTGA TCTCCGGGCT TCGAAAGAAA CTGGAGGATT ACGGCGAATA TATCGAAACA GTCCGCGGCG TGGGGTACCG GTTCAGGGAA ATCGAGGAAT GA
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Protein sequence | MAKEKILIVD DEKDILELLR LSLERDGYQV ACAESGEKAL EIVLSGRPDL VVLDLMLPGI DGLEVARAIR NDDRIQGTPI LMLSAKGEES DIITGLELGA DDYITKPFSP KILIARIRSV LRRQQAKAAP PDPGRTIAVS GITIHPRKHT VEVNGKKIDL TPSEFDILSF LASRPGLVFT RWQIVDKIRG EHYAVTDRSV DVLISGLRKK LEDYGEYIET VRGVGYRFRE IEE
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