| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1865 |
|---|
| Symbol | |
|---|
| ID | 5694705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2255651 |
|---|
| End bp | 2258251 |
|---|
| Gene Length | 2601 bp |
|---|
| Protein Length | 866 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641264463 |
|---|
| Product | pyruvate phosphate dikinase PEP/pyruvate-binding |
|---|
| Protein accession | YP_001529746 |
|---|
| Protein GI | 158521876 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATT CTTCCCATGT AAGCACCGGC TGGGAAAGCC TGGACGCCAT CATCGACCAC
CTGCGCACCG GTGATAACGT GGTGTGGCAG GTGGACAGCA TCGACGACTA CCAGCGGGTG
GTCACTCCCT TTGTCAACGC GGCTCTGGCC CGCAACGACC GGGTGGTCTA CATGCGGTTC
GGCCGCCACA CGGCCCTTGT GGAAGAGCGC CCTGACCTGG CGGTTTACCA CCTGCAGACG
GAAAACAGCT TTGAGTCCTT TTCCGTCCAG GTGCACAACA TCATCACCCG TGAAGGCCGG
GATGTGTGCT ATGTGTTTGA CTCCCTTTCC GACCTGCTCC ACCTCTGGGC CACGGACCGG
ATGATCGGCG ATTTTTTCTT TGTCACCTGT CCCTACCTGT TTCAGCTTAA TACCATCGCC
TATTTCGCCC TGCTGCGAAA TCATCACTCC TACAAGTCCA TTGCCCGTAT TCGGGAAACC
ACCCAGGTGC TGATCGATGT CCATAATTAC AAGGGCCAGA TCTGCGTTCA TCCCATCAAG
GTGGAACACC GTTATTCGCC CACCATGTTT TTCCCTCATA TAAAGGAAAA GGATGCCCTG
GCACCGGTGA TCAACAGCGT GGAGGCCACC CGGCTGTTTT CCCATCTTTC CCGCAGCAGT
ACGGCCGGTG CCCAGCGCCA TCTGGACTAC TGGGACCGAC TGTTCATGGA GGCCCGTACC
CTGCTGGAGT CCGATGCCGG TCCAGCGGAG CGGCAGGACA TGGTGCAGCA ACTGAGCCGG
CTGATGCTCA CTCGCAACAA GCGGATGCTG GCCCTGATCC GGGAGTATTT TTCGCTGGAG
GACCTGTTGC AGATCAAGGA GCGTATGATC GGCACGGGCT TTATCGGCGG CAAGTCGGTG
GGCATGCTGC TGGCCCGCAA TATTCTGGCA CGGGAAGAGG GGTTTGACTG GCAAGGTGTT
CTGGAGCACC ACGACTCTTT TTATATCGGG TCGGACGTGT TCTACTCGTT TATTGTTCAG
AACGGCTGGT GGCAGACCTT TATGGCCCAC AAGACCGGGG AAGGATATTT TGACAGGGCA
AAAGAACTCA AAGAAAAAAT TCCCCACGGC AGTTTTCCGG ACGAGATCGT GGAACGGCTC
ACCCTGATGC TGGAGTATTT TGGCCAGTCC CCCATTATCG TTCGTTCCAG CAGCCTGCTG
GAGGACGCCT TCGGTAGCGC CTTTGCCGGC AAGTATGACA GTTTTTTCTG CGTCAACCAG
GGCTCCCCGG AAAAGCGGTA CAGGGAGTTT GAAGGCGCGA TGCTGCGCGT TTTTGAAAGC
ACCATGGGCG AAGACGCCCT GGCCTACCGG CGGCAGAGGG GCCTGGACCG GTCCGACGAG
CAGATGGCCC TTCTGGTGCA GCGGGTATCA GGCGCTTATC ACAAGTCCTA TTTTTTCCCG
GAATTGGCAG GGGTCGGGCT TTCCCGGAAC CCCTTTGTCT GGAAGAAGGG GATGGACCCC
GGGGCCGGTA TGGCCCGCCT GGTGTTCGGC CTGGGTACAA GGGCCGTAAA CCGGGTGGAA
AACGATTATC CCCGAATCGT GGCCATGGAC GATCCCCTGG TCAAACCCCT GGCCGGCACC
GAAGACATTC GCCGGTTTTC CCAGCGGTTT GTGGACCTGC TGAACCTGGA GGAAAACCGG
CTTGAAACCG TTTCACTGGA AGGCCTGCTG GAAAAGGAGG TGCCCGGACG CATCGACCTG
GTCGGCGTTC GGGACACCGA GGCGGCCCAG CGGCTTCGGG AGATGGGCCG GCCGGAAAAG
GCGCACTGGA TACTGACCTT TGACCCCTTT CTTTCCCAGA CCCCGTTTGT CACAACCATG
CGGCGGCTGC TCTCCCGGCT GGAAACGGTT TACGAAAGCC CGGTGGACGT GGAGTTTACC
GTCAACTTTG CCGAAAACCA GGCCATGCAG GTCAACCTGG TCCAGTGCCG TCCATTCCAG
GGCTTGGACG ATTCAGTCGG CAGGCGTATT CCCGAAACCA TTGACCGGCG CGACACAGTG
CTTCGCGTGG CCGGCAATTT TATGGGCGGA GCCGTGTGGC GGCCCATTTC CCGGATCATT
CTGGTGGACC CGGAGCCCTA TGTCGCGCTT TCCATGTCGG AGAAATACAG CGTGGCCCGG
CTGGTGGGCA AACTCAACCG GCTGATCAAG GACCGGGAGG CCCAGGCCAC CCTGTTGATG
GGACCGGGCC GGTGGGGCAC CCATTCACCG GCCATGGGCG TGCCGGTGAG CTTTGCCGAG
ATCAACCAGG TGTCCGCCAT TGCCGAGATC AGCTACCAGA GCGGCAGCCT GATTCCCGAC
CTCTCCTTTG GCACTCACTT TTTTCACGAC CTGATTGAAA CCGGCATTTT TTACCTGGCC
GTCTATCCGG AAGACCCGGA GGTGGTGTTC AACCCGGAGT GGATATACGC CCTGCCCAAT
CAGCTGCCTG CCCTGGTGCC GGAGGCGGCC CGCTTTTCCC ATGTGGTCAA CGTGGTTGAC
ACCGTTGGCA CCGGCCTTGT GCTTCAGTCC GACATGGTCA CTCAGGTGGC TGCCTGCTAC
CTGGCACCAA AGGCCGGGTA A
|
|---|
| Protein sequence | MAYSSHVSTG WESLDAIIDH LRTGDNVVWQ VDSIDDYQRV VTPFVNAALA RNDRVVYMRF
GRHTALVEER PDLAVYHLQT ENSFESFSVQ VHNIITREGR DVCYVFDSLS DLLHLWATDR
MIGDFFFVTC PYLFQLNTIA YFALLRNHHS YKSIARIRET TQVLIDVHNY KGQICVHPIK
VEHRYSPTMF FPHIKEKDAL APVINSVEAT RLFSHLSRSS TAGAQRHLDY WDRLFMEART
LLESDAGPAE RQDMVQQLSR LMLTRNKRML ALIREYFSLE DLLQIKERMI GTGFIGGKSV
GMLLARNILA REEGFDWQGV LEHHDSFYIG SDVFYSFIVQ NGWWQTFMAH KTGEGYFDRA
KELKEKIPHG SFPDEIVERL TLMLEYFGQS PIIVRSSSLL EDAFGSAFAG KYDSFFCVNQ
GSPEKRYREF EGAMLRVFES TMGEDALAYR RQRGLDRSDE QMALLVQRVS GAYHKSYFFP
ELAGVGLSRN PFVWKKGMDP GAGMARLVFG LGTRAVNRVE NDYPRIVAMD DPLVKPLAGT
EDIRRFSQRF VDLLNLEENR LETVSLEGLL EKEVPGRIDL VGVRDTEAAQ RLREMGRPEK
AHWILTFDPF LSQTPFVTTM RRLLSRLETV YESPVDVEFT VNFAENQAMQ VNLVQCRPFQ
GLDDSVGRRI PETIDRRDTV LRVAGNFMGG AVWRPISRII LVDPEPYVAL SMSEKYSVAR
LVGKLNRLIK DREAQATLLM GPGRWGTHSP AMGVPVSFAE INQVSAIAEI SYQSGSLIPD
LSFGTHFFHD LIETGIFYLA VYPEDPEVVF NPEWIYALPN QLPALVPEAA RFSHVVNVVD
TVGTGLVLQS DMVTQVAACY LAPKAG
|
|---|
| |