| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1715 |
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| Symbol | |
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| ID | 5694553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2058184 |
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| End bp | 2060232 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264311 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001529596 |
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| Protein GI | 158521726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000203227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACA CCTTAGATAA ATCCGAGGCC AAAGAGCGCG TCACCTTTCT TCGAAACGAG
CTCCACCGCC ACAACCATCT TTATTACATC AAGGACGCGC CTGAAATTTC AGACGCGGAA
TATGACCGCC TGTTCAGGGA GCTGGCCGAG CTGGAAGCCC TGCACCCGGA CCTGGCCGAT
CCCGCGTCCC CCACCGCGCG CGTTGGCGCG CCGCCCACCG GGGATCTGGC CACCGTGACC
CGGACCATTC CCATGCTGAG CATCAGCAAC GCCTTTGCCG ATGAGGAGCT GTTTAAATTT
GACGAGCGGG TGCGGCGTTC ACTTCAGACC GGCGATCCCG TAACCTACCT TGCTGAGCCC
AAGCTGGACG GCACGGCCGT GGAGCTGGTG TATGAAAAGG GCCGCCTGGT GATGGCCGCC
ACCCGGGGGG ACGGGGTCAC CGGCGAGGTG ATCACGCCCA ACGCCAGAAC CATCGGCTCC
GTGCCCCTGC ACCTGACCGG CGATGCCGTT CCCATGCCCA ACCTGCTGGA GGTGAGGGGC
GAGGTGGTGA TGACAAAAGA GGGGTTTGAA AAACTCAATG CCCTTCGCCT GGAGCGGGAC
GAACCCCTGT TTGCCAATGC CCGCAATGCC GCGGCCGGAT CGTTGCGGCA GCTGGATTCC
CGCGTTACCG CGTCCCGTCC CCTTACGCTG ATCGCTTACG GCATCGGGCG GTTTTCGGAA
ATTGACGCGA TTTCCACGCA GCACGAAATC GTGACCCGGC TGGCCGATTT CGGTTTTAAG
ACCAACTCCC ATGTACGGTG GGACCTTGAC ATAAAAGGTG TTATCGATTT TTATCGTTTT
CTTGAAGGCA TACGGCCCTC GCTGCCGTAC GACATTGACG GCATGGTGGT TAAGGTAGAC
CGCCTTGACT TTCAGCGCAC CCTGGGTGCT ACGTCCCGCA GCCCCCGGTG GGTGATTGCC
TACAAGTTTG CCGCGTCCCA GGAGACCACA CGGCTGGTTG CCATTGATGT TCAGGTGGGA
AGGACCGGCG CGCTGACCCC GGTGGCCCTG CTGGAACCGG TCACCATCGG CGGCGTCACC
GTCTCCCGGG CCACCCTGCA TAACGAAGAC GAAATCGCGC GCAAGGACAT TCGCGTGGGT
GATGCCGTGC TGGTGCAGCG GGCCGGAGAT GTGATTCCGG AAGTGGTCCA GGTGATCACC
GGCCGGCGGA CCGGGAATGA AACACCATTT CAAATGCCGG CTACCTGCCC GGTTTGTGGG
ACACCGGTGG TGCGCGAACC GTCCGAGGCG GTGACCCGTT GCGTCAATGC CGCCTGTCCG
GCCCAGGTCA AGGAACGGAT CAAGCATTTT GCCGCCAAGG GAGCCTTTGA TATTGATGGT
CTCGGCGACA AGCTGGTGGA CCAATTGGTA GACCGGGGCA TGATTGCTTC CTATGCCGAC
CTTTTCACGC TGCGGGTCGA AGATCTGGAA TCCCTGGACC GCATGGGCTT CAAATCCGCG
CAAAACCTTG TGGCCGCCAT TGAAAAGAGC CGGCATATAA CCTTTGACGC GTTTCTTTAC
GGCCTGGGCA TGCGCCATGT CGGCGCCCAC GTGGCAACGC TGCTGGCCCG GGCCTTTCCC
GGCATCGACC AGTTGGCCGA GGCGGCGCTG GCAGGACAAC TGAACTCGAT AGACGGTATC
GGTGGCGTGA TTGCCGAAAG CGTCAAAAAC TTTTTTTCAA ATCCTGAAAA CCGGCAGACA
GTGGACAGTT TGATAAATCA CGGCGTTGCC CTGCAATTTC CCGAAAAAGA GGCAGCCACG
GGCCACGAGA TGCCGCTGGC GGGAAAAACC TTTGTGCTGA CCGGCACGCT GGAAAAAATG
ACCCGGGACC AGGCCCGGCA GCGCATTGAG GCGGCCGGGG GCAAGGTGAC CGGTTCGGTG
AGCAGCCGGA CCGATTACGT AGTGGCCGGC GAGGCCCCCG GTTCCAAGCG GGACAAGGCC
GAGGCCCTGG GCGTGGCCAT ACTGGATGAG GCTGGTCTGC TCAGTCTGCT TGAGCCGGGT
GAGCGGTAA
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| Protein sequence | MHNTLDKSEA KERVTFLRNE LHRHNHLYYI KDAPEISDAE YDRLFRELAE LEALHPDLAD
PASPTARVGA PPTGDLATVT RTIPMLSISN AFADEELFKF DERVRRSLQT GDPVTYLAEP
KLDGTAVELV YEKGRLVMAA TRGDGVTGEV ITPNARTIGS VPLHLTGDAV PMPNLLEVRG
EVVMTKEGFE KLNALRLERD EPLFANARNA AAGSLRQLDS RVTASRPLTL IAYGIGRFSE
IDAISTQHEI VTRLADFGFK TNSHVRWDLD IKGVIDFYRF LEGIRPSLPY DIDGMVVKVD
RLDFQRTLGA TSRSPRWVIA YKFAASQETT RLVAIDVQVG RTGALTPVAL LEPVTIGGVT
VSRATLHNED EIARKDIRVG DAVLVQRAGD VIPEVVQVIT GRRTGNETPF QMPATCPVCG
TPVVREPSEA VTRCVNAACP AQVKERIKHF AAKGAFDIDG LGDKLVDQLV DRGMIASYAD
LFTLRVEDLE SLDRMGFKSA QNLVAAIEKS RHITFDAFLY GLGMRHVGAH VATLLARAFP
GIDQLAEAAL AGQLNSIDGI GGVIAESVKN FFSNPENRQT VDSLINHGVA LQFPEKEAAT
GHEMPLAGKT FVLTGTLEKM TRDQARQRIE AAGGKVTGSV SSRTDYVVAG EAPGSKRDKA
EALGVAILDE AGLLSLLEPG ER
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