Gene Dole_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1536 
Symbol 
ID5694373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1830474 
End bp1830929 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content54% 
IMG OID641264131 
Productrubrerythrin 
Protein accessionYP_001529417 
Protein GI158521547 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00146194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTG ACGACTTCAC AGATATTATC CGATTTGCCA TGGACAACGA GCTGGAAGCC 
CAGACCTTTT ACGAAGAGGC CTCGGCCCGG CTGGAGAACC CGGCTCTCAA GCAGATGTTT
ACCGAACTGG CCGGAGAAGA AAAACGCCAC CGGGACCTGC TCCGGGCCCT TTACACCAGC
AACCGGTTTG GGGACTTTTT CCATGAAGAC CGGGATTTTC AGGTGGCTGA AACCGTTGAG
ATGCCGGCCC TTTCCACGGA TATGAAGCCT GCCGACGCCT TTGCCCTGGC CATGAAAAAG
GAAGAAGCCG CCATGAAGGA GTACACGGCC CTGGGCGATG CGTGCAGGGA TGAAAAGCAG
AAAAGGCTTT TTCTTGACCT GGCCGCCATG GAAAGAAGCC ACAAGCTGAA AATGGAAAAG
GCCTTTACCG ATATCGGTTT TCCGGAAGTC TGGTAA
 
Protein sequence
MEFDDFTDII RFAMDNELEA QTFYEEASAR LENPALKQMF TELAGEEKRH RDLLRALYTS 
NRFGDFFHED RDFQVAETVE MPALSTDMKP ADAFALAMKK EEAAMKEYTA LGDACRDEKQ
KRLFLDLAAM ERSHKLKMEK AFTDIGFPEV W