Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1526 |
Symbol | |
ID | 5694363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1819976 |
End bp | 1821043 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264121 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001529407 |
Protein GI | 158521537 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.172251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTC AAAAAGGAAA GCTTATGAAA ACAGCGGTGA CACAACTTCT GGAATGCGAA TATCCGGTAT TGCTTTCCGG CATGACCGGG GTCAGCACGC CGGAACTGGC CGGCGCGGTG AGCAATGCCG GGGGACTGGG GCTGCTGGCC ACGGCCGATC TTACCCTGGA GCAGACCCGG CAGGCGGTCC GGCGGACGCG CAGGATAACG GACCGGCCTT TTGGCGCCAA CGTGCCGCTT CTGATTCCAG GCGCTGAAGA GAAGATGGCG GTGCTGGTGG AAGAAAAGGT GCCGGTGGTC AACTACACGC TTGGCAGTGG AGAACAAGTG GCTGATGTGG TCCACCGGTA CGGCGGAAAA GTCGTGGCCA CAGTGACCAC GGCAAAACAT GCCCTGTCAG CTGAAAAACA CGGGGCCGAC GCCCTGATCG TGACCGGCCA TGAGGCCGCG GCCCATGGTG GAGCCGTGGC TTCCATGGTG TTGATCCCCG GCATTGTGGA CCGGGTGAAC ATCCCGGTAA TCGCCGCCGG CGGCATTGCC GACGGCAGGG GGCTGGCCGC GGCCCTTGTG CTGGGGGCCG AAGGCGTGGC CATGGGCACC CGTTTCATGA ATACCCGGGA AAGCCCGGTT CACGACACCA TGAAGCAGCT CTGCAACCAG AAAGCGGTGG AAGACACGGT TTATTCAGAC CGGATCGACG GCCTGCCCTG TCGGGCACTG GACTCTTCGG GCGCCAGAAA AATGATGGCC GACCGGCTTT ACCTGTTCAA GGCCCTTGCC AACTCCCGTT TCGCGGCCCG GGCATACGGG TTCCCATGGA TTGCGGCCAT GGCCGGCATC CTGTTGTCCG GCTATCGCCG GTCGAAACAG CTGGCCCGCA TGGCCAATGC CTTTCGCGCC GTCAAACTGG CCATTGATGA CGGGGATCAG AAACGGGGGG TCTTTCTCAT GGGCCAGGTG ACCGGCCTTA TTGACGAAAC CCTGACCGTC GGCCAGGTCA TGGAGAAGAT TCTTATTGAA GCGGCATCGG CCCGAGCAAG GCTGGCGGCA GGAATGGGGC AGGAATAG
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Protein sequence | MNFQKGKLMK TAVTQLLECE YPVLLSGMTG VSTPELAGAV SNAGGLGLLA TADLTLEQTR QAVRRTRRIT DRPFGANVPL LIPGAEEKMA VLVEEKVPVV NYTLGSGEQV ADVVHRYGGK VVATVTTAKH ALSAEKHGAD ALIVTGHEAA AHGGAVASMV LIPGIVDRVN IPVIAAGGIA DGRGLAAALV LGAEGVAMGT RFMNTRESPV HDTMKQLCNQ KAVEDTVYSD RIDGLPCRAL DSSGARKMMA DRLYLFKALA NSRFAARAYG FPWIAAMAGI LLSGYRRSKQ LARMANAFRA VKLAIDDGDQ KRGVFLMGQV TGLIDETLTV GQVMEKILIE AASARARLAA GMGQE
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