| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1331 |
|---|
| Symbol | |
|---|
| ID | 5694165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1586542 |
|---|
| End bp | 1587453 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641263923 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001529212 |
|---|
| Protein GI | 158521342 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAC AGGCACAGCA AAAGATCCTG GTTCTGTTTG ACGGCTCTCA GCGTTCCCGG
CAGACCGTTG AGCAGTTGGC GTGGATGGAA TCGTTTAAAA CAAGAGAGAT TGTTCTGTTC
CAGGTATTTG CCGATTTTCC GGAAAACTAC TGGGACCTGA CATGGGAGAA AAACAATGCC
AGGGCCGTGG AACAGTTTGC CGAATGGCGT AAGCGCATGG CCGACGAAAA CCACATGTAC
CTGGAGACCG CGCGAAAGGT TCTGCTCAAC GCTGGATTTG ACGCCAGGCG GGTTTCCGTC
AAGCTCCAGA AGCAGGAGAA GGATGTGGCC ACGGATATTC TGGCCGAGGC GCGCAACGGA
TATCACGCGG TGATCATGCG GCGACGGGGC ATGAACACGA TCCAGAACGT TGTGCTGGGC
AGCGTGTCGA GCAAGCTGCT GGCCAATTTG TCGGACCAGC CGGTGCTGCT GATGGGAAAA
CGGTCCTTGA GCAAGAAAAT GGTGATCGGT ATTGACGGCT CTCCGTCGTC CATGCAGGCG
GTAAAATTCG TGGCCGATCT TTACGGGGGT CATGGCTACA TGGTGGAACT GCTGCATGTC
ATTCGGTCCC ACAACCTGGA CTTCATGCCC ACTGAGATGA TTGAGGCGCA CAAGCAGCGG
ATGGATAGGA CCTTTTCAGA GATGCGGGAA GTGCTGGTGG CAGCCGGTTT TGAAGCCGAA
AACGTGGAAG GAAAAATCAT CACCGGTGCG GAGAGCCGGT CTGAAGCCAT TGTGGTGGAG
GCCGAGTCGG ACGATACCGG CGCCATTGTC GTGGGCAGAA GGGGGCTTTC CAGGGTTCAG
GCCTTTTTTA TGGGCCGGGT CAGCAACAAG GTGGTTCACC GGGGCAAGGA GTTTTCCGTG
TGGGTCATCT AG
|
|---|
| Protein sequence | MNTQAQQKIL VLFDGSQRSR QTVEQLAWME SFKTREIVLF QVFADFPENY WDLTWEKNNA
RAVEQFAEWR KRMADENHMY LETARKVLLN AGFDARRVSV KLQKQEKDVA TDILAEARNG
YHAVIMRRRG MNTIQNVVLG SVSSKLLANL SDQPVLLMGK RSLSKKMVIG IDGSPSSMQA
VKFVADLYGG HGYMVELLHV IRSHNLDFMP TEMIEAHKQR MDRTFSEMRE VLVAAGFEAE
NVEGKIITGA ESRSEAIVVE AESDDTGAIV VGRRGLSRVQ AFFMGRVSNK VVHRGKEFSV
WVI
|
|---|
| |