| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1272 |
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| Symbol | |
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| ID | 5694107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1520688 |
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| End bp | 1521755 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263866 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001529155 |
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| Protein GI | 158521285 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGGC TGAAACCCGC AATCGAAAAA GCCATGGAAG GAGCCCGGCT GGACATCGAA
GAGGCCCTGG CCCTTTATAC GAAAGCCGAC CTGCTTGTCC TGGGCCAGCT GGCGGTTCGG
CAGCGGTGGC GGCTGCGGCC CGAGCCGGTG GCCACCTTTG TGGTGGACAG AAACATCAAC
TACACCAATA TCTGCGTGTC CGGCTGCCTG TTCTGCGCCT TTCACGCGGC TCCGGGCAGC
GCGGCCGGGT ATGTGCTGTC CGAGGCGGAA CTGAAAAAAA AGCTGGATGA GACCGTTATA
CTGGGCGGCA CCCAGGTGCT GCTTCAGGGC GGCATGAACC CGGACCTGGA CCTGGCCTAT
TACAAAGATC TGCTGAAGTT CATCAAGTCC GTATCCGGCC TCCATATTCA CGGGTTTTCC
CCGCCGGAGA TCGCCTTTTT CTCAAAGCAG TGGGGGCTCT CCGTGGAGGC GGTGCTGGGG
GAGCTTGTAG CCGCCGGCCT GGATTCGATT CCCGGCGGCG GGGCCGAAAT TCTGGCCGAT
GAGATTCGCA ACAAAATATC GCCGGGCAAG TGCGATACTG CCACCTGGCT GGGTGTGATG
GAGACGGCCC ACGCTATTGG CCTTCGGTCC TCGGCTACCA TGATGTTCGG CCATGTTGAA
ACACCGCGCC ACCTGATTGA CCACCTGCTG GCGATCCGGG ATCTTCAGGA CCGCACCAGT
GGTTTTACCG CCTTTATTCC CTGGAGCTTT CAGCCGCAAA ACACCCGGCT GAAAGGAACC
CCGGCGTCGG CCGTGGATTA CCTGAAGGTG GTGGCCCTCT CCCGGCTGGT GCTGGACAAT
GTGCCCAACA TTCAGGCGTC CTGGGTGACC CAGGGAGACA AGATCTCCCA GGTGGCCCTG
GGGTTCGGCG CCAACGACAT GGGCAGCACT ATGATCGAAG AGAACGTGGT GGCTGCCGCC
GGAGTCCGTT TCCGCCTGCC CAGGGAGGCC ATCATCCGCC TCATTGAAGG GGCCGGGCTT
CGAGCCGCCC AGCGGGACTT CTTTTATCGG ATTCTGCAGT ACCACTGA
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| Protein sequence | MDRLKPAIEK AMEGARLDIE EALALYTKAD LLVLGQLAVR QRWRLRPEPV ATFVVDRNIN
YTNICVSGCL FCAFHAAPGS AAGYVLSEAE LKKKLDETVI LGGTQVLLQG GMNPDLDLAY
YKDLLKFIKS VSGLHIHGFS PPEIAFFSKQ WGLSVEAVLG ELVAAGLDSI PGGGAEILAD
EIRNKISPGK CDTATWLGVM ETAHAIGLRS SATMMFGHVE TPRHLIDHLL AIRDLQDRTS
GFTAFIPWSF QPQNTRLKGT PASAVDYLKV VALSRLVLDN VPNIQASWVT QGDKISQVAL
GFGANDMGST MIEENVVAAA GVRFRLPREA IIRLIEGAGL RAAQRDFFYR ILQYH
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