| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1179 |
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| Symbol | |
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| ID | 5694013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1407506 |
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| End bp | 1408189 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263772 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001529062 |
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| Protein GI | 158521192 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGACA AGCTGGAACA GATAAGAGAA CGGATTCAAG CCGCAACCGA GGCGTGCGGC
CGGGATCCGG CAACCGTCCG GCTGGTGGCG GTAAGCAAGA CCCAGCCGGT TTCCCGTATC
GCGGAGGCCA TTGCCGCCGG CGCCACCGAC CTGGGTGAAA ACTACATTCA GGAAGCCAAA
GAGAAAATCG AATCCCTGGC CGGCCATTCG GTCTGCTGGC ATTTTATCGG CCACCTTCAA
TCCAACAAGG CAAAAATCGC GGTGTCCCTG TTTGACTGGA TTCATACCGT GGATTCGGTC
AAGCTGGCCG CGGAGATCGA CAAGCACGCG GCCAAACTGG GGAAAGTCCA GAAAATTCTC
ATCCAGGTCA ACACCGGGCA GGAAAGGTCC AAATCGGGGG TGGCCCCCGA AGACATGGCC
GGCCTGGTGA CCGAGATCAG CCGGTTCGCG CACGTTACCG TTCAGGGTCT GATGGCCATC
CCCCCGTTTT ACGCCGATCC CGAGGCGGTG CGGCCCCATT TTAAAAAGCT GCGCATGCTG
CGGGACGCGA TTGAAAAACA GCAAATTCCC AATGTTGTCA TGGAAGAACT CTCCATGGGC
ATGAGCGGCG ATTTTGATGC GGCTATCGCG GAAGGGGCCA CCATGGTCCG CATCGGCACG
GCCATATTCG GAGCCCGGCA ATGA
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| Protein sequence | MKDKLEQIRE RIQAATEACG RDPATVRLVA VSKTQPVSRI AEAIAAGATD LGENYIQEAK
EKIESLAGHS VCWHFIGHLQ SNKAKIAVSL FDWIHTVDSV KLAAEIDKHA AKLGKVQKIL
IQVNTGQERS KSGVAPEDMA GLVTEISRFA HVTVQGLMAI PPFYADPEAV RPHFKKLRML
RDAIEKQQIP NVVMEELSMG MSGDFDAAIA EGATMVRIGT AIFGARQ
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