Gene Dole_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1102 
Symbol 
ID5693936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1312212 
End bp1313309 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content57% 
IMG OID641263696 
Producthypothetical protein 
Protein accessionYP_001528986 
Protein GI158521116 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00400546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA AAAATTCATT TCATACCAGG CTGACCATTG CCCACTACTT TCTTTTTTTC 
CTGCTGTTTG TCGCCCTGTT TGCCAGCTAT AAAATGATCG CGCCCTACCT GGACCCGATC
CTGCTGGCGC TTATCTTCGC GGCCATGGCA AATCCGGTCT ACCAGTGGTT TGTCAAGAAA
ACCAAGGGCC GGGAAAACCT CTCCGCCGGT CTGGTCTGCC TGCTGCTGAC CCTGGTGATC
GTGATCCCGT GCATGATCAT GCTGACGGTG ATCATCGCCC AGGGCATCGA CTCGGTGGGC
GCCATCAATC GGTGGGTGGC GGCCGGCAAC CTGGAAAAGC TCAAGGACGC GCCCCTGGTC
AGAACAGCGG TGGACTTTAT GCAGCGCTAT CTGCCGTCCA GTGTGCTGGC AGGGGTGGAC
CTCCAGGCCC TGGCCATCAA AAGTTCATCT GCCGCCGGCA AGTTGCTGGT AAGCCAGAGC
GGGGCGATTC TCGGCAACAT CTCCATGGTG GTGGGCAAAT TTTTTCTCAT GATTTTTGTT
TTCTTTTTCG TGCTCAAGGA CCAGCAGCGG CTTTATGATT ACATTCTTCA CCTGGTGCCC
ATGTCTGCCG AGCACGAGAC CGTGTTGATT CAGAAGATGA AGGATGTCTC CCGGTCCGCG
GTGCTGGGCA GTTTTCTCAC GGCCCTGGCC CAGGGCGCGG CCGGAGGCCT CGCCTTTGCC
ATCTGCGGAA TGCCCGGATT CTTCTGGGGC GCGGTCATGG CCTTTGCGTC GCTGATCCCG
GTGGTGGGCA CGGCCCTGGT TTGGGTGCCC GCGGCAGCGT ACCTGCTGAT TTCCGGAAAA
ATCGGCCTGG GGGTTTTTCT GATTATCTGG TGCGTGGTGG TGGTGGGCAT GATCGACAAC
CTGCTGCGAC CCCTGTTCAT GAGGGGCGGG GCCGGAATGA GCACGGTGGT GATCTTTTTT
GCCATTTTAG GCGGCATTCA TCTGTTCGGC CTGATCGGCC TGATCTACGG CCCGCTGATC
TTCGGCATCA CCATGGTGAT GCTCTATATC TACGACCTGG AGTTTGACGC CTTTTTAAAG
GGCCAGGACA GGATATGA
 
Protein sequence
MTEKNSFHTR LTIAHYFLFF LLFVALFASY KMIAPYLDPI LLALIFAAMA NPVYQWFVKK 
TKGRENLSAG LVCLLLTLVI VIPCMIMLTV IIAQGIDSVG AINRWVAAGN LEKLKDAPLV
RTAVDFMQRY LPSSVLAGVD LQALAIKSSS AAGKLLVSQS GAILGNISMV VGKFFLMIFV
FFFVLKDQQR LYDYILHLVP MSAEHETVLI QKMKDVSRSA VLGSFLTALA QGAAGGLAFA
ICGMPGFFWG AVMAFASLIP VVGTALVWVP AAAYLLISGK IGLGVFLIIW CVVVVGMIDN
LLRPLFMRGG AGMSTVVIFF AILGGIHLFG LIGLIYGPLI FGITMVMLYI YDLEFDAFLK
GQDRI