Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1070 |
Symbol | |
ID | 5693905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1264439 |
End bp | 1265821 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641263666 |
Product | aminotransferase class-III |
Protein accession | YP_001528956 |
Protein GI | 158521086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAA CAAGCCGGAA AACCATATCC CGGAAGGAAC GGAATCAGGT TTTCGATGCC TTTGGAAAAC ACATTTCCAA GGGACAGATC CGTTATCTGA CCGCAGGTCA CCTGGATGTA CTGGAAGGAG AGCGAGACGG CTTCCGGTTT TATGAAGGCC AATCCGGTAA AGCTTATCTC GACGGGTTTT CATCAGCCGG ATGTTTCAAT GTCGGGCGCT CTAATCCGCA GATCATCCGG AAACTGGAAG CGGCTGTGGA TGACTATGAT ATGGGCACCT ACGGCATGCT GTCCGCGCCG AAAATCAAGC TGGCCAAACT GCTGGCAGAC ATAGCCCCGG GTGACCTGAA CCGGGTTTTG CTGTGCGGAA CCGGCGCCGA CGTGGTTGAA GGCGCATTAA AACTGGCCAG GGCCGCCACC GGGCGCAATG AAATTATATC CATGCTGAAG GCCTACCACG GCCATTCCGG GATGAGCCTG TCGGCCAATG GCAAAGACTA TTACAAAGAA TTGTTTCTGC CGTTAATGCC GGGTTTTTGT TTTGCCCCCT TTGGTGATCT TGAGGCGATC CGTCAAATGG TGTCCAAACG TACCGCGGCC ATCATACTGG AGCCGATTCA AGGGGAAGGC GGCATCCACG TGGGAACGGA CGAATACCTC AAGGGGCTTC GTGAACTCTG CGACCAGTTG GGGATCATGC TTGTTTTTGA TGAAATCCAG ACCGGTTTTG GTAGAACCGG CAAGCTCTGG GCCTCCGAAC ATTCCGGTGT GGTGCCGGAT ATAATGCTTC TGGCCAAATC AATCGGCGGG GGGGTGTATC CCAACGCCGC GATTCTTTAT CGCGACCGCA GCGAGCTCAC CGACTATGTC GACCGTAACC CCGAGTTTCA TCTGTCCATG GGCGGCGGCT CTGATCTGGG CTGTATTGTG TCCACTGCCG TTATTGAATA TATCGTTGAG AATAAAGTCT GGGAAAATGT CGCCAAGATG GGCAACCGCC TGCTGGAAGG GCTCCGAAGT ATTCAGAACG AAAATCCGGG ACAGATCCTG GAAGTCCGCG GCCGGGGCAT GATGGTCGGG ATCGAGTATA AACAGGAATT CATGGGTATG CTCATGGCCG ATTGCCTGGC AACCCACGGC ATGTTTGCCG CCTATTCCGG CAATGCGCCC CAGGTGATGC GGTTCCAGTT CCCCACAGCC GCGACAGCCG AAGATATTGA TGAGGCCCTG GCGGTTATTC GCAAAGCCAT CAAGCTGAGC AAATTGTATA TGCTGGCCTT GGGACCGCTT TCCAAAATCC CCTTTGTCCG GGAAGCGATG AATAAGGGGG ATATTATGGT CACCATCAAC AACTTGCTGC GCAAGGCCGC ATTCTGGGAA TAA
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Protein sequence | MNQTSRKTIS RKERNQVFDA FGKHISKGQI RYLTAGHLDV LEGERDGFRF YEGQSGKAYL DGFSSAGCFN VGRSNPQIIR KLEAAVDDYD MGTYGMLSAP KIKLAKLLAD IAPGDLNRVL LCGTGADVVE GALKLARAAT GRNEIISMLK AYHGHSGMSL SANGKDYYKE LFLPLMPGFC FAPFGDLEAI RQMVSKRTAA IILEPIQGEG GIHVGTDEYL KGLRELCDQL GIMLVFDEIQ TGFGRTGKLW ASEHSGVVPD IMLLAKSIGG GVYPNAAILY RDRSELTDYV DRNPEFHLSM GGGSDLGCIV STAVIEYIVE NKVWENVAKM GNRLLEGLRS IQNENPGQIL EVRGRGMMVG IEYKQEFMGM LMADCLATHG MFAAYSGNAP QVMRFQFPTA ATAEDIDEAL AVIRKAIKLS KLYMLALGPL SKIPFVREAM NKGDIMVTIN NLLRKAAFWE
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