| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1048 |
|---|
| Symbol | |
|---|
| ID | 5693883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1234654 |
|---|
| End bp | 1237098 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641263645 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001528935 |
|---|
| Protein GI | 158521065 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCTTGCCAT CAATATCGAT ACCATCACAC TCAATATTGT TTCAAGCCTT
CTGTCGGAAC ACACCACTGA TTTTGAAATT CTCACGGCCG AGAAGGTCGG AGAACTGGAC
GATATCGCCG GCAAGATAAA GGTTGACATC GCATTGATCG ACCTTGTCAA GCCTTCACCG
GCGGATATCG AGGTGCTCAA ATTCGTAGCC CAAAGCCACT CCCGTCTGCC CCTGATGGTG
ATGACCGCAT TTGAAACAGG TGAGATCGAA ACCGCTCTCA AAGCCATCGG CCCGGTGCGC
TATTTTGAAA AACCGGTGGA CTTCAAGGCC CTGGCGGACA GGCTGTTTGA CGAAATGGAA
AGCGGCGTGG GCGGCGCGAT TCACGGTATC AGCCTGGCCT CCTTTCTTCA GATGTCCGAA
ATGGAGCGCA CCTCCTGCAC CCTGCGGATA AAAACCGAAG AAAAAAAGGG CCACCTTTTT
CTTGTCAAAG GCGCCCTGAT TGCGGCGGAA ACAGACAGCC TCTCCGGTGA AGAGGCGGTG
TTTGAGATCC TTTCCTGGAG CAGCCCCTCC ATAGAAATAG AAAATGCGGT GCCGGACCGG
AAAAAAGAGA TTACTGCCCC GCTGATGACC CTGCTCATGG AAGGGTTGAA ACGCAAAGAT
GAAAAAGCCG GCAAAAAACC CAAAAAAGGC AAAATCGCCA TTCAAAAGGC CGCCAGCATT
CCGGTGACAC CCGCCGGGGA AAAACTGGAA CTGGAAGCAA CCGCCACTGA AGGGCTGCAA
GATAAGGCCG CAAAAAAGAA GCCGACAAAA GAGCAAAAAG ATGCCCCGCC CCCGGACGAA
GAGACACAGC CGGCCGCGCT GGAGACACTT GAGCAACTCA AGGCGTCGGG TAAAATCACC
GATGCCAGCA AGGTACTCAG GCGCAAGCGG CGGATTTCCC TCACCTTCAA AATAGTGGTG
GTAATCCTGG TTCTCCTGAT CCTTGCCTGC CTCTGGTTTT TTGAAGCCAG GCCATGGCTG
GTCAAACGCC AGTACGAACA GGCGCTCACT GAGGTCCGGA AGGCGGGCGC ACTGGAGAAA
AAGCTGGCCG CGTTGGACGC CTATATCACG ACTCATCCCG ACAGCCCTTA TAAGTCCGCC
GCAGAAAAAC AGAAACTGGA TGTCGCTAGA GAGATGGAGA TCCAGGCCTT TGACGCCACC
CTCCAGAAAA CCAGCGACCT GTCTATTGAT GACGCCTTTG AAGAAAAAGC GCTGGCCCTC
TACAACGATT TTCTTGATAA GTACCCGGAG AGTGTTTATG CGGAAGAGAT CCAAAAACGC
ATGGCCGATA TTCCGGCAAT CATGAAAGAC GCCGAATACG GTAAGCTGCA ACAAATTCCG
AAAAATGACT TCAGCGCCCG TATTGCTGCT TATAAGGCCT ACATCGAAGC CTACCCAAGG
GGAGAGAACA CCCAGAATGT CCGGCGCATG CTTTCTGATC TGGGTGAAGA CTTTTACGCT
CACATCGTCA AATCTCAAGC TGAGTGCGAC AATGAGAAAA ACTGGGAATC ATGCATCAAG
CTGTGTAAAT ACTTTGCCCG ACACTTCCCG AACCACCCGC GAACAGCGGC CGTTGAGCGA
TCCCAGGCTC TCATGGAAGG CCAGGCCGCC TTGGCAAACC TGATGGAAAA AGTCAAGGAT
GCGGGGAGCG ATATCACAGT TGTCAAAGGG CTCTACCAGA ATTTCCTGAA AACATATCCC
GACAGTCCGG TGAAAGGTAC CGTAACCGCC AGACTGGCCG CCATCGAAAC CGGTAAGCGA
CAAAAAATGG AGTGGGAACA GACCCTGGCC TATATTCAGG ACAGCCGCAA CTCCATTTTC
GACAGAACAG CCCGAATGCG CCGGTATGTT GAGACCAATC CACCCCAGGC CTATCGCAAG
GACGCTCAGG AACTGCTGGC ATGGCTGGAG GTAGAAGAGG CAAAAGTGCT TCAGACCCTT
CAGCAGCAGC AAAGCCTGAT GGAGCAGCAA CAGGAAAAAC GGGAGCAACT GGAACGCATG
CGGGTTGAGA TACGCAAAAA ACTGTCGGCG ACAAAAGGCC GGTACCTGGA ACGGCCCGCC
GACTGTATTT TTGACACGCA GACCAAGCTG ACGTGGGCCA TGCTGGACTC TTCGGCCATG
GCGGAACAGT GCATGAATTA CAAAACAGCG GCGATGTATG TAAAAAGTCT CAAAACCGGT
GGATACACCG ACTGGCGACT GCCCAAGCCC AATGAGCTGC TGGTCATATA CAATGACAGG
CCCGCGTTTC CAGCGGCCGG GGCTCCCTGG TACTGGACGT CGGAAGTTTT TTCCGCAGCC
TGGCACCAGA AAGTAAACAC AGTCAAACGA ACGGCGGAAG GCACCTGGGA AAAGGCAGAG
ATGGATCTGG AGCAGTGCGG TGCGGTACGG GCCGTCCGGC CATAA
|
|---|
| Protein sequence | MKKILAINID TITLNIVSSL LSEHTTDFEI LTAEKVGELD DIAGKIKVDI ALIDLVKPSP
ADIEVLKFVA QSHSRLPLMV MTAFETGEIE TALKAIGPVR YFEKPVDFKA LADRLFDEME
SGVGGAIHGI SLASFLQMSE MERTSCTLRI KTEEKKGHLF LVKGALIAAE TDSLSGEEAV
FEILSWSSPS IEIENAVPDR KKEITAPLMT LLMEGLKRKD EKAGKKPKKG KIAIQKAASI
PVTPAGEKLE LEATATEGLQ DKAAKKKPTK EQKDAPPPDE ETQPAALETL EQLKASGKIT
DASKVLRRKR RISLTFKIVV VILVLLILAC LWFFEARPWL VKRQYEQALT EVRKAGALEK
KLAALDAYIT THPDSPYKSA AEKQKLDVAR EMEIQAFDAT LQKTSDLSID DAFEEKALAL
YNDFLDKYPE SVYAEEIQKR MADIPAIMKD AEYGKLQQIP KNDFSARIAA YKAYIEAYPR
GENTQNVRRM LSDLGEDFYA HIVKSQAECD NEKNWESCIK LCKYFARHFP NHPRTAAVER
SQALMEGQAA LANLMEKVKD AGSDITVVKG LYQNFLKTYP DSPVKGTVTA RLAAIETGKR
QKMEWEQTLA YIQDSRNSIF DRTARMRRYV ETNPPQAYRK DAQELLAWLE VEEAKVLQTL
QQQQSLMEQQ QEKREQLERM RVEIRKKLSA TKGRYLERPA DCIFDTQTKL TWAMLDSSAM
AEQCMNYKTA AMYVKSLKTG GYTDWRLPKP NELLVIYNDR PAFPAAGAPW YWTSEVFSAA
WHQKVNTVKR TAEGTWEKAE MDLEQCGAVR AVRP
|
|---|
| |