Gene Dole_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1032 
Symbol 
ID5693867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1218416 
End bp1218877 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content57% 
IMG OID641263629 
Productgeneral secretion pathway protein G 
Protein accessionYP_001528919 
Protein GI158521049 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTCTA ACCAACGTTC TTCTGTGCAG AAAAAAAACT TCAGCCCGGG TTTCACGCTG 
ATCGAGTTGC TGGTGGTGCT GGTCATCCTC GGCATCATCG GCGTCACAGT GGCACCCCGC
ATCCTGGGAA AACCCGACGA GGCCAAGAAG ATAAAGGCCG CCACTACCAT TGAGGCCATT
TCCACGGCGT TGAAGCTCTA TAAGCTGGAC AACGGCGCTT ATCCCACCAC CTCCCAGGGC
TTGGAGGCCC TTGTGCGCAA GCCGGAGAGC GGCAATACGG ACAACTGGCA GGAGGGCGGA
TACCTGGAAA AGGGGAAGGT TCCCCGCGAC CCGTGGGGCA ATCCTTTTGT CTACATGTGT
CCCGGCGTCC ATGGTGATTT TGATATCATT TCCTACGGGG CCGACGGCGC GCCCGGCGGC
GAAGGAAAAT ACGCGGATAT CAAAAGCTGG GAGATCGAAT GA
 
Protein sequence
MYSNQRSSVQ KKNFSPGFTL IELLVVLVIL GIIGVTVAPR ILGKPDEAKK IKAATTIEAI 
STALKLYKLD NGAYPTTSQG LEALVRKPES GNTDNWQEGG YLEKGKVPRD PWGNPFVYMC
PGVHGDFDII SYGADGAPGG EGKYADIKSW EIE