Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0742 |
Symbol | |
ID | 5693577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 865085 |
End bp | 865813 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641263339 |
Product | CRISPR-associated RAMP Csm3 family protein |
Protein accession | YP_001528629 |
Protein GI | 158520759 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGA CCACCTCTTA CTTGATAACT GGCCAGATAG AAATACTGAC CGGACTTCAC ATCGGCGCCG GCAAGGACGC CGTTGAAATC GGCGGCGTTG ACAATCCGGT CGTTAAAAAC CCCTATACCG GCGAGCCTTA TATCCCGGGC TCGTCACTCA AAGGAAAACT GCGGTGCCTG ATGGAGTGGG TCACCGGGTG TGTGGAAGAC TCGGGCAAAA CCTGGGAAGG CGGCGGCGAG ACCGGCCCGG ACAAACTGGC GGCAGACCCC ATTCTCCGGA TCTTCGGCAC CACCAGCAAA AACTGGGATG CCGGCCCCAC CCGGCTGATC GTCCGGGACG CCTGCCTGAA TAAGGAATGG AAAGAGCGGA TCATCGACCG GGGGCTCCCT TTGACCGAGG AAAAATTTGA AAACAACATC GACCGGATTC AGGGTAAGGC TGGCCCTGGT ATCCGCAAGA CAGAACGGGT GCCGGCCGGC TCGCTTTTTG ACTTTGAGAT GGTCTACCGG ATTTTTGACA CGAACGATGA AGGCCGGACC GATGTGGATA ATCTGGACAA CCTGTTTGCG ATTATGCGCC TGCTGGAACA GGATGCCCTG GGCGGCTCAG GCTCCCGCGG TTATGGCCGC ATCCGTTTTG ACAAGCTCAA AAAAGACGGC CAGGACATTC AGGCAAAGTT TGAATCCATC GACGTCTCTA AACTGATTAA ACAACAAAAG GTCGCGTAA
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Protein sequence | MKLTTSYLIT GQIEILTGLH IGAGKDAVEI GGVDNPVVKN PYTGEPYIPG SSLKGKLRCL MEWVTGCVED SGKTWEGGGE TGPDKLAADP ILRIFGTTSK NWDAGPTRLI VRDACLNKEW KERIIDRGLP LTEEKFENNI DRIQGKAGPG IRKTERVPAG SLFDFEMVYR IFDTNDEGRT DVDNLDNLFA IMRLLEQDAL GGSGSRGYGR IRFDKLKKDG QDIQAKFESI DVSKLIKQQK VA
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