Gene Dole_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0401 
Symbol 
ID5693220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp462093 
End bp462866 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID641262982 
ProductABC transporter-related protein 
Protein accessionYP_001528288 
Protein GI158520418 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA TCGTGGATAT GCACAACGTT TCATTTACCT ATGGCGGTCC GGCCGTGATA 
GAAAACGTCA CCCTGTCCGT ATCCGAAGGG GAGTTCGTGG CCCTGATCGG GCCCAACGGC
GGGGGCAAGA CCACGCTGCT CAAGCTGATG CTGGGCCTGG TCAAACCGCA AAAAGGAACC
GTTCGGGTGC TGGGCCGGCC CCCTGAAAAG GCATCCCACC ATATCGGATA CGTGCCCCAG
GACATTCACT TAAACCTTGC ATTCCCCGTC ACTGCCCTGG ACGTGGTGCT GATGGGAAAG
CTTGCACCCG GCAAACGGTG GATCGGCCGA CCGGCCCGTC ACAAAACCGA CGCCCTGGCC
GCCCTGGCGC AGATGGGCAT GGAGGCCAGC GCGCATACCC GCATCGGAGA GCTTTCCGGG
GGCCAGCGCC AGCGGGTTTT TATCGCCCGG GCCCTGGTCA CCCAACCGAA ACTGCTGCTG
CTGGACGAAC CCACGGCCAG CATCGACACC AGGGGCCAGG CCGACTTTCT GGAATTGCTG
CATGATCTGA ATCAACAGGT CACCATCGTG ATGGTAAGCC ACGACCTTCT GGCCATCTCG
CACCATGTGA CCTCGGTGGC CTGCGTCAAC CGGGGCCTTC ACTACCACCG CCGGTCCGAA
CTGGCCGGCA GCCTGATCAA TACGTCGTGC CCCTGCACCG TGGAGTCGCT CTGCCCGGTG
GAGATGGTGG CAAGGGAAAC CCCGCACCTT TTTATTCGAA ACCGGAAACC GTGA
 
Protein sequence
MTAIVDMHNV SFTYGGPAVI ENVTLSVSEG EFVALIGPNG GGKTTLLKLM LGLVKPQKGT 
VRVLGRPPEK ASHHIGYVPQ DIHLNLAFPV TALDVVLMGK LAPGKRWIGR PARHKTDALA
ALAQMGMEAS AHTRIGELSG GQRQRVFIAR ALVTQPKLLL LDEPTASIDT RGQADFLELL
HDLNQQVTIV MVSHDLLAIS HHVTSVACVN RGLHYHRRSE LAGSLINTSC PCTVESLCPV
EMVARETPHL FIRNRKP