Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0353 |
Symbol | |
ID | 5693172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 404494 |
End bp | 405888 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641262934 |
Product | major facilitator transporter |
Protein accession | YP_001528240 |
Protein GI | 158520370 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.939472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACATC TCACCGTTAC CCGGAAACTG GCCTATTCAG GGCCGGCCTT TTCCCTGGCC GTGGTGGGAA TCCCTGTCTA TGTCTATATT CCGAAATTTT ACACCGACGT GATAGGGGTT CCCATCGGCG CCCTGGGCCT GATTCTGCTG CTGGTCCGGT TGTTTGACGC CGTTACCGAT CCGGCCATGG GATATATTTC CGACCGGCTC AAAACCCCCT TTGGCCGGCG CCGGCCCCTG ATTGCCGCCG GTGCCGTGCT GACCGTGGCC GCCATGGCCC TGCTTTTCAA CCCGCCGGCC GGCCTGGGAA CCGCGGCGGC AACCGCCTGG TTTGCCGTGA TGGTGGCGGC CCTGTTTCTC TTCTGGACCG TCATCATTGT CCCGTATGAA TCCCTGGGAC CGGAACTGAC CTATGACTAT AATGAAAGGA CCGCCCTGTT CGGCATGCGG GACGGCGCGC TGATCGCCGG CACCCTGGTC GCGGCCGCCT CCCCTGCCAT TGTCAAGGCC CTGTGGCATA TCGGGGAAAC CGCGGAGGAT TTCCGTGAAG TGTTTCATGT GCTTTCCCTG CTCTACGGCC CCCTGATTCT TGCCAGTGCC GCCTGGTGCG TCTTGTCTTT CCGGGAACGA ACGACAGTGC GGCCCGAAAC CGCGGCCCCC TTTTTTTCCG GCATGGCATC CAGCCTGCAA AACAGGCCGT TCCGTATTCT GCTGATCAGT TATACCATCA GCGCCATCGG CAGCAACCTG CCGGCCACCC TGATCCTTTA TTACGTGGAG TATGTGCTGC ACTCGCCCAG GGCCGATCTT TTTCTGCTTA TATATTTTGT CACCGGCATC CTGCTGCTGC CGTTGTGGGT GGCCGGGGCC AAACGGTTTG AAAAAAAGAA CATGTGGCTG GCCGCCATGG CGGTCAACAC CGGCGCCTTT TTCGGTGTCT TTTTCCTGGG GCCGGGGGAC GAGTGGGCCT ACGGCGTTCT GGTGGCAATT TCCGGCATGG GGTTCGGCGC CAGCCTGGCC ATTCCTTCGG CCATGCAGGC GGATGTCATT GATTACGACC AGCTCCAGAC CGGCCTTCGC CGGGAAGGGG TCTATATCGG GTTCTGGTCC GTGGCAAAAA AGCTGGCCGC GGCCGTTGGG GTGGGAGCGG GGCTGGCACT TTTGGGTGTT TCCGGGTATG ATCCCACCAT AAACCAATCC CCGGCCGTGG TGACCACCCT TCGCGTTCTC TATACCCTGG TCCCCTGTTT GTGCAATCTT GTCGCCATGG CCGTTGCCTG GCGCTATCCG CTGACACGGG AGGTGCATCA GCAGATTCAC CGGCAGATCC AGCGCCGACT GGCCGGAGAG CCCTTTGTCG ATCCGCTGGC TTCAGCCGGC AAGGCTTCAG CATAA
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Protein sequence | MRHLTVTRKL AYSGPAFSLA VVGIPVYVYI PKFYTDVIGV PIGALGLILL LVRLFDAVTD PAMGYISDRL KTPFGRRRPL IAAGAVLTVA AMALLFNPPA GLGTAAATAW FAVMVAALFL FWTVIIVPYE SLGPELTYDY NERTALFGMR DGALIAGTLV AAASPAIVKA LWHIGETAED FREVFHVLSL LYGPLILASA AWCVLSFRER TTVRPETAAP FFSGMASSLQ NRPFRILLIS YTISAIGSNL PATLILYYVE YVLHSPRADL FLLIYFVTGI LLLPLWVAGA KRFEKKNMWL AAMAVNTGAF FGVFFLGPGD EWAYGVLVAI SGMGFGASLA IPSAMQADVI DYDQLQTGLR REGVYIGFWS VAKKLAAAVG VGAGLALLGV SGYDPTINQS PAVVTTLRVL YTLVPCLCNL VAMAVAWRYP LTREVHQQIH RQIQRRLAGE PFVDPLASAG KASA
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