| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0337 |
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| Symbol | |
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| ID | 5693156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 385983 |
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| End bp | 387716 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641262918 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001528224 |
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| Protein GI | 158520354 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.238028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCC AACCCTGGCC CACCACCAAC TGGCCCAAAG GCGTTTCACG GGAGATCGCG
GACTTTGAAC ATCCTCTGTT TTCCTTTCTT GATGATGCGG CCCGTGACTA TCCCGACAAT
GTGTATACCA TTTTTAACGG CGGCACCCGC ACCTTTGCCC AGGTAAAGCA GGCCGCCGAC
CGGGTGGCCA ATTTTCTGGC CGCCAGCGGC ATCAAAAAAG GGGACCGGGT GGCCATTTTC
CTGCCCAACC TGCCGCATTA CCCGGAGATC TACTTCGGCA TTCTCAAGGC CGGGGCCGTG
TGCGTGACCT GCAACCCTCT CTATACACCG TCGGAACTCA ATTACCAGCT CAAGGACTCG
GGATCAAAGG TGGTCTTCTG CATGGACCAT CCCCAGTTCT ACCCCACCAC GGTGCAGGCG
ATTCAGGAGA CCGGTGTTGA AACCGTGGTC ATCTGTAACG TCAAGGCCTT TCTGCCGCCG
GTCAAGCGGA TTCTGGGCGC CCTGCTCAAC AAGATTCCAA AGGCCGAAAG CCACGAGCCC
GGCCACGTGA TGTACGACGA GATCATGGCG TCCTATCCGG CCCAGGCCCC GGATGTTGAA
ATCAATCCCT CTGAGGACCT GGCCCTGATC ATCTACACCG GCGGCACCAC CGGCGTGCCC
AAGGGCGCGG CCCTGACCCA TGCCAACTTC GTGTTTGATG TCAAGGCCAT GGACGAGTGG
GTCTATCTCT CCCAGGAGCC CGGGGCCCCG CCGGAAAAGA TTCGCAAAGG CGGGTTTCAC
TGCTACATCG GGGTCCTGCC CTGGTACCAC AGCTTCGGCA TGACCATGTG CATGCTCACC
TCCTGCGCCA GCGGCAGCCG GCTGATCTGC GTGCCCGATC CCCGGGCCGG CAACCCGCCC
TTTACTGAGG TGCTCAAGCT GGTTCAGACC TACCGGCCTA CCATTCTCGT GGGCGTGCCC
ACCATCTTTT CGGCTTTTGA AAATCATCCC CTTCTGGACA AATACGACCT GAGTTCCCTG
ATTTGCTGCG CCTCCGGCGG GGCCCCGCTT CCCGTGGAAC TGGCCAAAAA CTTCGAGGCC
AAGACCGGCT CCATCATCTT TGAAGGCTAC GGGCTGAGCG AAACTTCGCC GGTGATCACC
GGCAATCCCA GCGACAAGGA CCTTCGCCTG TTCGGGTCCG TGGGTTTTCC CGTTTCCAAC
ACCGACATCA AGATCGTGGA CTCTGAAACC GGCATAACCG TATTGCCCCA GGGTGAGGAC
GGGGAGATCG CCGTAAACGG TCCCCAGGTG ATGAAGGGCT ACTGGCAGAA GCCGGACGCG
GACAAAGAGG TATTCCGTGA AATTGATGGA AAGCGTTATT TTCTCACCGG CGACATCGGC
CATATCGATG AGAACGGGTA CATTCTCATC ACGGATCGCA AAAAGGACCT GATCCTGGTG
GGCGGGTTCA ACTGCTATCC CCGGGAGGTG GAGGAGGTGC TGTTCCAGCA TCCCAAGGTG
GCCCAGGCCG CTGTTGTCGG CGTGCCCGAT CCCAGAAGCG GGGAAGCGGT CAAGGCCTAT
GTGCAGCTTC GGGAAGGCAT GACCGCCACC GAGCAGGAGA TTCTCGACTT CTGCAAGGAG
AAGCTGGCCG GCTACAAGCG GCCCCGCGCC ATTGAATTCC GGGACGCCCT GCCCACGTCC
CCGGTGGGCA AGGTCCTGCG CCGGGTGCTG AAGGAGGAGG CAAAGCAAAA ATAA
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| Protein sequence | MSIQPWPTTN WPKGVSREIA DFEHPLFSFL DDAARDYPDN VYTIFNGGTR TFAQVKQAAD
RVANFLAASG IKKGDRVAIF LPNLPHYPEI YFGILKAGAV CVTCNPLYTP SELNYQLKDS
GSKVVFCMDH PQFYPTTVQA IQETGVETVV ICNVKAFLPP VKRILGALLN KIPKAESHEP
GHVMYDEIMA SYPAQAPDVE INPSEDLALI IYTGGTTGVP KGAALTHANF VFDVKAMDEW
VYLSQEPGAP PEKIRKGGFH CYIGVLPWYH SFGMTMCMLT SCASGSRLIC VPDPRAGNPP
FTEVLKLVQT YRPTILVGVP TIFSAFENHP LLDKYDLSSL ICCASGGAPL PVELAKNFEA
KTGSIIFEGY GLSETSPVIT GNPSDKDLRL FGSVGFPVSN TDIKIVDSET GITVLPQGED
GEIAVNGPQV MKGYWQKPDA DKEVFREIDG KRYFLTGDIG HIDENGYILI TDRKKDLILV
GGFNCYPREV EEVLFQHPKV AQAAVVGVPD PRSGEAVKAY VQLREGMTAT EQEILDFCKE
KLAGYKRPRA IEFRDALPTS PVGKVLRRVL KEEAKQK
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