Gene Dole_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0247 
Symbol 
ID5693065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp279465 
End bp281609 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content42% 
IMG OID641262827 
Producthypothetical protein 
Protein accessionYP_001528134 
Protein GI158520264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGACAG GACGCTACAG CATAGCTGAA CTGTTTGGCA ATCGCCACAT AGAGCAACTG 
GTGATTCCAG AGATACAACG CGACTATGTA TGGAAAGCTG AGCAGGTTCA GGGCTTGCTG
GACTCGATCC TAAAAAATTT CAATGATTGG AAACAAGCAA AGGGGACTCC TCGTTTTAAA
GTTGTTCCAG AAGAACCTCA GGATATTGAA AAACATCCTT CCCTGGAAAA CGACTTCACG
GCGTTCTATG CACAGCGGTA CCATGGCACT AATATCGGAT TTGTCTACGC ATACAGCGAT
GGCGATCTTC CTGGACAATA TTATCTGATT GATGGGCAGC AACGTCTAAC CACATTATAC
CTTGTTCTTT TAGCAGTAGC CTCTCGCAAC GATGATCTTA AAGAGCGATT TCGAGCACGT
TATTGCCTCC AGTCGACTGA TGCCAATCCT GGTGCAAAGG CAATTCCAAC CAAACTTGAT
TATCGGTTGC GGGAACATAT TACCGATTTT TTCCACCATT GCGTACCTTA TCTTTTGGAA
AATCCGGAGC ATGCCGAAAC ACTCCAACAA CAAAGCTGGT ACCGGAAGAG ACTGGACGAG
GATAAAACCG TCAAAAACCT GATCAATAAT TTTACTAAAA TCTATTCGCA TTTAGAGAAC
GAACTGGATA GTGATTGTTC AGATGACGCT TTCAAATACC TGGATGATCT TGTGGATTGT
TGGTATTTCG ATACCAATGA AAGCGTTCAG GGTGAGGAAC TTTATATCTA TCTCAACGCC
CGCGGCGAAA GTACCGCAAC GAATGAGAAC AAAAAAGCGG AGTTGCTTAA GTCCCTATCT
GATGAGAAAA AGGAAGATTG GGGGAAAAAA TGGGAAGAAT GGCAGGATTT CTTCTGGCAG
AAACGTCGAA AGGGACTTGA GGATAAGCAT AATAACCCCA ATGCCGACCG GGGATTCAAC
AGCTTTCTGG CATGCATCAA AAATCTTGAG AAGCTGAAGA ACAAGGGAGG CAACGAGTGC
GAAGAAACAT CTCTCGAAGT CATAGAAAAA TATTTATCCG CACTTAAATG GTTGGGAGAC
AATAAAGGCA GTTTCAAGAA ATTATACTCT TACTCGGGGT GGGTCGATTC ATGGTTTAAT
GAAATATGGA GCGTTTTTAA CAATCCGGCG ATGACGGATT GGGACGCTAA TTTTAAAGAC
GATAAAAAAC CCACAGAACG CAACAAGATG GTTTTGATAT GGGGCAGTCT TCTTTCAATC
TTCAGCTATT TTGAAAGAAA TGACTGGGAA CCCGTGAGAA TTAATATTGA TGATATTGAA
CGTATATTTC GAACGATTAG AATTTTTTGG CTTCGATACA AAAACTATAA CCGCTCCGTT
GCTTCCCTAC CGGCGGCTGT AAAAGACATC CTGTTTAATG ACTCTCCGGA GTTTATAGGT
TCCGAATCCA AGGAGGAAGC ATTAAAGTGG AACCTTCTTA AAAATACGGG AGACGAAGAA
CGCCGTCATT TTGAAGCGGT CATATGGGAA ATCGAAGACC ATCCTTTTAA CATAGACGGC
CGCGATCTTG ACAACCAGAA TATCAGCCAT CTCGTCGATT TGAACGAACA GTTGACATTA
GAAACACTTA ATAATGTCAA AGAAACATTC TACAGGCTTT TCCCAAAAGA TAACAAGAAA
CAAGAAGAGC GCACCATTGC CCAAATATTG CTTTATTACG GTGAATTCTG GCATCACATC
AGCCCATGGT ATCATAAAAA CTACGATTTC AGTGATTGGA GACGAACCAT TCGGGGTAAA
GGTAATGTTG AGCAAAATGT CGCGGCCAGC ACGACGGTAT TCCGACTATT TTTCCAAGAC
TTTATGAAGA AGAATAAGAG CCCAAACGAG TTCTTGAAGA TGAAACAGGA CGAATGGCCA
GAGAGTATTG ATCCTGTTTC TGAGACATCC TTGAGAAAAG CCCTGATATG GTATAGCCAA
AAATTGCAGG ATAACTTCCT TAAGGAAGGG ATGTATGTGG TGATAGACCG GCCTCAATAC
GAAGAGAGCG ATGCCAATTT CCCAAAACTT AGTCCGATCT GGAATACATC AGGTTCCTTT
AAAGGTAGGA ACAAAAAAAT GTCGGAGCAG AAGGAAAATG GCTAA
 
Protein sequence
MRTGRYSIAE LFGNRHIEQL VIPEIQRDYV WKAEQVQGLL DSILKNFNDW KQAKGTPRFK 
VVPEEPQDIE KHPSLENDFT AFYAQRYHGT NIGFVYAYSD GDLPGQYYLI DGQQRLTTLY
LVLLAVASRN DDLKERFRAR YCLQSTDANP GAKAIPTKLD YRLREHITDF FHHCVPYLLE
NPEHAETLQQ QSWYRKRLDE DKTVKNLINN FTKIYSHLEN ELDSDCSDDA FKYLDDLVDC
WYFDTNESVQ GEELYIYLNA RGESTATNEN KKAELLKSLS DEKKEDWGKK WEEWQDFFWQ
KRRKGLEDKH NNPNADRGFN SFLACIKNLE KLKNKGGNEC EETSLEVIEK YLSALKWLGD
NKGSFKKLYS YSGWVDSWFN EIWSVFNNPA MTDWDANFKD DKKPTERNKM VLIWGSLLSI
FSYFERNDWE PVRINIDDIE RIFRTIRIFW LRYKNYNRSV ASLPAAVKDI LFNDSPEFIG
SESKEEALKW NLLKNTGDEE RRHFEAVIWE IEDHPFNIDG RDLDNQNISH LVDLNEQLTL
ETLNNVKETF YRLFPKDNKK QEERTIAQIL LYYGEFWHHI SPWYHKNYDF SDWRRTIRGK
GNVEQNVAAS TTVFRLFFQD FMKKNKSPNE FLKMKQDEWP ESIDPVSETS LRKALIWYSQ
KLQDNFLKEG MYVVIDRPQY EESDANFPKL SPIWNTSGSF KGRNKKMSEQ KENG