Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0180 |
Symbol | |
ID | 5692997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 198631 |
End bp | 199026 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641262759 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001528067 |
Protein GI | 158520197 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00581457 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGGAA CAAAGCATCT GATCAACCCG CCAGGCACCG AAGGGATTTA TAAGTCAATG CAGTTTTCCC AGGCCGTTAA ATCCGGCAAC ACGATTTATG TATCCGGCCA GGTGGGGGTT GACGAAAATT TTAAGCCCGG ATCAGGCATT GAAGAACAGG CCAACCTTGC GTTTTTAAAC CTTCAACATG TTCTGGCAGA AGCCGGCGCG ACCCTTGAAG ATATTGTGGA GCTGGTCACA TACCACACGT CCATGAAGGA CATTCTGGGG TTTTCAAAAG TAAAAGCCAA ATTTATTCCC AAAGATTATC CTGCCTGGAC CGCCGTTGGC GTGACAGAAC TTGTTCTGCC GGACCTTCTT GTAGAGATAA GAGCCACAGC GGTTATATCC GGTTGA
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Protein sequence | MSGTKHLINP PGTEGIYKSM QFSQAVKSGN TIYVSGQVGV DENFKPGSGI EEQANLAFLN LQHVLAEAGA TLEDIVELVT YHTSMKDILG FSKVKAKFIP KDYPAWTAVG VTELVLPDLL VEIRATAVIS G
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