Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0175 |
Symbol | |
ID | 5692992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 194367 |
End bp | 195065 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641262754 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001528062 |
Protein GI | 158520192 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000233696 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CGATAGGCCC CGGCCAGAAA AAACCGGCCA AAAACACCGT GCCCGGGAAA AAGGGAGATG ATACCCGGAA AATGATACTG GCCGCTGCCA GACAGATATT TGCCGCCCAC CCTTACAATG CCGCCAGCAT CCGCATGATC GCCACCCAGG GCGATTTTTA CCACGGCCTT ATCCGGTACC ATTTTCCCAG CAAGGCCGGC ATCTTTGAAG CGGTGATGGA AGATGCCTGC CGGTCCCTTG TCCAGGCCAA CAAAGAGTGG CTGGTGGAAA TATCAACCTT CCCGCCGGAA AAAGCGCTTT CCACCTATTT GGACAGATTC ATCGAATATT TTCAAAAACA GCCCGCCGTG CTTCGCATCA TTATCAACAA CCTCTCCCAC GAGAATCCGG CCACCTTGCC CGGCTATCAC CACCTGACCG GTTTTCTGGC CGACACCCGC CGGGATTTTG AAGCCATATT TCCAAACCTG TTTGCAACCG GAGATGTCAG CCGGTTTTTA AGCAGCCTCA ACGCCCTGAT TCTTCATTTT CTGGGCGCCG GTTCCATAGA AGCCCAAATC ATGGGGTTTC CCAGCCAGAG CCGGGACTAC CTGCAGTGGG TTAAAGAGAC CCTGTTTTTT ATCTTTCTGC CGGTGCTGGA AACCGCGGTG CGCCAATCCT CTGAATCCGC CCTGGATACC GGCAAATAA
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Protein sequence | MKKTIGPGQK KPAKNTVPGK KGDDTRKMIL AAARQIFAAH PYNAASIRMI ATQGDFYHGL IRYHFPSKAG IFEAVMEDAC RSLVQANKEW LVEISTFPPE KALSTYLDRF IEYFQKQPAV LRIIINNLSH ENPATLPGYH HLTGFLADTR RDFEAIFPNL FATGDVSRFL SSLNALILHF LGAGSIEAQI MGFPSQSRDY LQWVKETLFF IFLPVLETAV RQSSESALDT GK
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