| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0163 |
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| Symbol | |
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| ID | 5692980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 179699 |
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| End bp | 181978 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262742 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001528050 |
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| Protein GI | 158520180 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0161736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTG CAACCGCTAC GGCGCTGGGC ATTAGCGAAA AACAGGTTCA GGCCGTGGCC
GCCCTGCTGG AAGACGGTGC CACCATCCCC TTTATCGCCC GTTACCGCAA AGAGGCCACC
GGCAGCCTGG ATGAAGTGGC GGTTGCCCGG ATTCGCGACA CCCTGCACCA GCTCAAGGAA
TTAGACGACC GGCGCCAGGC GGTTCTGGCG TCGCTTGAAA AAAACGGCCA CCTGACCGAT
GAATTAAAAC AGCGGGTCCT GGCGGCAGAC ACCCTGACCG TGCTGGAAGA CATCTATCTT
CCCTTTCGGC CCAAGCGCCG GACCCGGGCC GTGATGGCCA GGGAAAAGGG CCTGGAGCCC
CTGGCCCTGG TTCTTCTGGA ACAAAAAGGG ACAGACCCTC AGGCCGAAGC GTTGCCCTTT
GTTGACCCGG AAAAGGGCGT GGCCTCGGTT GACGAGGCCC TGGCCGGGGC CCGGGACATT
ATCGCGGAGA TGACCAGTGA AGACGAGGCC GCCCGGTCGG CCCTGCGGGA TCTGTTTTTC
ACCAAAGGCA TGGTCTCGTG CCGGGTCGTG ATGGGAATGG AGGAGGCCGG GGCCAAGTTT
AGGGATTATT TTGACTGGAA AGAGCCGGTG GCCACGGTGC CGTCCCACCG CATGCTGGCC
ATGCGGCGCG GGGAAAAGGA AGGTTTTCTT GTTCTTGCCA TCGCCCCGGA AGAGCCGGAC
GCCATTGCCA TTTTAGAGCG ACTGTTTGTC AAAGGAGATA CCGAAGACGC GGTCCAGGTG
GCCCTGGCGG TAAAAGACAG CTACAAGCGG CTGCTCTCCC TTTCCATGGA AACCGAAACC
CGCCTTGCTG CCAAAAAGAA AGCGGATGCC GAAGCCATCC GGATCTTTGC CGAAAACCTT
CGCCAGCTCC TGCTGGCCCC GCCCCTGGGC GCGAAACGGG TGATGGGCAT TGACCCGGGA
TTCCGGACCG GCTGCAAGGT GGTCTGCCTG GACCGGCAGG GAAAGCTGCT CTGCTGGGAC
ACGGTGTATC CCCATTTTTC CGAAGGCAGG GAGCAGGCGG CGGCGGACCG GATAAAGTCG
CTGTGCGACC AGTTCGAGGT GGAGGCCATT GCCGTGGGCA ACGGCACCGC CGGCAGAGAG
ACCGAGGCGT TTGTAAAAGC CGTCGCTTTT TCCCGGCCGG TGCAGGTGGT CATGGTCAAT
GAAAGCGGGG CCTCCATCTA TTCGGCCTCC GAAGTGGCCA GAGAAGAGTT TCCGGACCAT
GACCTGACCG TGCGGGGAAG CGTTTCCATT GCCCGGCGCC TCATGGACCC TTTGGCCGAG
CTGGTCAAGA GCGACCCTAA ATCCATCGGC GTGGGCCAGT ATCAGCACGA CGTAAGCCCC
GCCGAATTAA AACAGTCCTT AGATGACGTG GTGGTCAGCT GCGTTAACCG CGTGGGCGTC
GACCTGAACC GGGCCAGCGC CCAGCTGCTG ACCTATGTAT CGGGCCTGAA TGCCGGCATC
GCTAAAAACA TCTTGGTCTA TCGGGAAGCA AACGGCCCGT TTGCCTCCCG GGAGGCATTA
AAAGCCGTGC CGCGTTTCGG GCCCAAGACC TTTGAACAGA GCGCCGGTTT TCTGCGCATA
CCGGATGCGG CCAATCCCCT GGACGCCAGC GCGGTTCACC CGGAAAGCTA TGCCATTGTC
GAGGCCATGG CCAAAGACCT TGGCAAACAG GTGGCCGACA TCATGCACCA GACGGACCTG
CGTAAACAGG TCGACCTTTC CGCCTATGTC ACCGGCACCG TGGGCCTGCC CACCCTGACC
GACATTCTGG ACGAACTGGC CAAGCCGGGC CGTGATCCCC GGCAGGCCTT TGAGTCGGTC
TCTTTTATCG AAGGAATCAA CACCATTGAT GACGTGCAGC CGGGCATGAA ACTGCCGGGC
ATTGTCACCA ACATCACGGC TTTCGGTGCC TTTGTGGACA TCGGCGTGCA CCAGGACGGG
CTGGTCCATA TCAGCCAGAT GGCGGACCGG TTTGTCAAAT CTCCGGCAGA CATCGTCAAG
GTCCAGCAGC GGGTTATGGT CACGGTGCTG GAAGTGGACA AGGAGAGAAA GCGGATCAGC
CTCTCCATGA AAGCCGAACG CCCGGCGCCC ACGGCGGCCC GGGAGGAGAC CGCGGGACCC
TCTCCCAGGC CCGACACCCC GGGCAAGGCA AAAGGGAAAA AGCCGGAGAA AAAAGAGAAG
AGAAATATCC CCGCCAATTC GGCCCTGGCC GAAGCCTTGC GAAAAAGCGG CCTGACCTGA
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| Protein sequence | MIPATATALG ISEKQVQAVA ALLEDGATIP FIARYRKEAT GSLDEVAVAR IRDTLHQLKE
LDDRRQAVLA SLEKNGHLTD ELKQRVLAAD TLTVLEDIYL PFRPKRRTRA VMAREKGLEP
LALVLLEQKG TDPQAEALPF VDPEKGVASV DEALAGARDI IAEMTSEDEA ARSALRDLFF
TKGMVSCRVV MGMEEAGAKF RDYFDWKEPV ATVPSHRMLA MRRGEKEGFL VLAIAPEEPD
AIAILERLFV KGDTEDAVQV ALAVKDSYKR LLSLSMETET RLAAKKKADA EAIRIFAENL
RQLLLAPPLG AKRVMGIDPG FRTGCKVVCL DRQGKLLCWD TVYPHFSEGR EQAAADRIKS
LCDQFEVEAI AVGNGTAGRE TEAFVKAVAF SRPVQVVMVN ESGASIYSAS EVAREEFPDH
DLTVRGSVSI ARRLMDPLAE LVKSDPKSIG VGQYQHDVSP AELKQSLDDV VVSCVNRVGV
DLNRASAQLL TYVSGLNAGI AKNILVYREA NGPFASREAL KAVPRFGPKT FEQSAGFLRI
PDAANPLDAS AVHPESYAIV EAMAKDLGKQ VADIMHQTDL RKQVDLSAYV TGTVGLPTLT
DILDELAKPG RDPRQAFESV SFIEGINTID DVQPGMKLPG IVTNITAFGA FVDIGVHQDG
LVHISQMADR FVKSPADIVK VQQRVMVTVL EVDKERKRIS LSMKAERPAP TAAREETAGP
SPRPDTPGKA KGKKPEKKEK RNIPANSALA EALRKSGLT
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