| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0102 |
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| Symbol | |
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| ID | 5692917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 113359 |
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| End bp | 115038 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641262679 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001527989 |
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| Protein GI | 158520119 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACA TTCGACTGGT GCTGGCAGTG GTCTTATCGG TCCTGGTGCT GCTGGTATGG
CAGGTCTTTT TTATTGGTTC TCCTGAGGCG CCGGTCAGGC CGGACGGCGC ACCGGTTGCG
CCGGCACAGG AGGCGGCGGC CCCACCTAAC CCGGCCGCCG GAGATGTGGC CTTGCCCCGG
GAAAACGCCC CGCCGGAACA GGTTACCCCT GCCGATTCGG CCCTGGTTCC GACAGAGGCC
CCTGCCGCGC CGGTGGTGGT GGAGACCGGC CTTTATACGG TTACCCTCAA CGGCAATGGC
GCCCATATAT CCGATTTTGT ATTAAAAAAC TATCGGGAGA CCAACGACCC GGCGTCTCCG
GCCAAACGGC TGCTGTCTGA CAACAACCCC CAGGGCTCGC TGCGCGTGAA CCTGGAGGGA
GACACCCTGG CCGGGATGGC GAACGGGCCT TATTCCGCGG ATGTGGCGGA TGGGCCGGTG
GTGGTGTCCG ACCAGCCACG ATCCGTTGTT TTTACGCGGC AATTTCCCGG CGGCCGCGTG
GTGGAAAAGC GCTATACGTT TACACCGGAC AGCTACATGA TCGACCTGGC CGTAACCCTG
AAAAACGGGT CTGAAACCCC GCTTTCCGGC AACCTGGCCG TGACCCTGGC CCGCTATTTT
ACAGACGACG GCAGCCGGTT TGTGTTTGAA GGACCCAGCG CCCTTGTGGG TCATGATCTG
GAGGAGATCA AGCTGGGCGA CATTCAGAAG AAGGCCAGCC TGACGGGCTC CCTTGCCTGG
ATATCCATTC AGAACCGGTA CTTCATGTCG GCCCTGATTC CCGAGACCCC CACCGAGGCC
GCCATGCGGC TCTCCCGGAC CCCGGAGCAG GTGGTCACCG CCACCTACCT GGCGCCGGCG
CGTACGGTCG GTGCCAACAG CACCGAAACC TATCGCTTTT CGGTTTTCAT GGGCCCAAAA
AGCGTTCAGA TCCTGGGCAG GGCCGGACAC GCTCTTGACC GGGCCGTCAA CTTCGGCTTT
TTTGATTTTA TCGCCCGTCC CTGTCTCTGG CTGATGAACT TTCTTTACCG CTATATTCCC
AACTACGGCA TTGCCATTAT CATTATTACC CTTCTGTTCA AGCTGGTTTT CTGGCCCCTT
GGCAACAAGA GCTACAAGTC CATGGCGGAG ATGAAGCGGC TGGCCCCGCT GATGGCCGAG
ATCCGGGAAA AATACAAGGA CGACCGGAAA AAAATGAACG AGGAGGTGAT GAACCTCTAC
CGGACCTACA AGATCAACCC CCTGGGCGGG TGCCTGCCGA TTCTTGTGCA GATTCCGGTG
TTTTTCGCTT TTTACCGAAT GCTTTACCAG GCCATCGAAC TTCGCCACGC GCCCTTTTTC
GGGTGGATAA ACGACCTGTC CGCGCCGGAC CGGCTTTTTA ACTTTGATGT CTCCCTGCCG
CTGATTGCGC CGCCGGTGGG GATTCCGGTG CTCACCATTG TCATGGGCGC CACCATGATC
ATTCAGCAGA AGCTTCAACC GCCCATGGGA GACCCGACCC AGGCGAAAAT CATGATGCTG
ATGCCGATCT TCTTTACGTT CATATTTATC AACTTTCCTT CGGGGCTTGT TCTCTACTGG
CTTGTAAACA ACACCATTTC CATTTTCCAG CAGTACTACA TTACACGGAA GAACGCATAG
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| Protein sequence | MEHIRLVLAV VLSVLVLLVW QVFFIGSPEA PVRPDGAPVA PAQEAAAPPN PAAGDVALPR
ENAPPEQVTP ADSALVPTEA PAAPVVVETG LYTVTLNGNG AHISDFVLKN YRETNDPASP
AKRLLSDNNP QGSLRVNLEG DTLAGMANGP YSADVADGPV VVSDQPRSVV FTRQFPGGRV
VEKRYTFTPD SYMIDLAVTL KNGSETPLSG NLAVTLARYF TDDGSRFVFE GPSALVGHDL
EEIKLGDIQK KASLTGSLAW ISIQNRYFMS ALIPETPTEA AMRLSRTPEQ VVTATYLAPA
RTVGANSTET YRFSVFMGPK SVQILGRAGH ALDRAVNFGF FDFIARPCLW LMNFLYRYIP
NYGIAIIIIT LLFKLVFWPL GNKSYKSMAE MKRLAPLMAE IREKYKDDRK KMNEEVMNLY
RTYKINPLGG CLPILVQIPV FFAFYRMLYQ AIELRHAPFF GWINDLSAPD RLFNFDVSLP
LIAPPVGIPV LTIVMGATMI IQQKLQPPMG DPTQAKIMML MPIFFTFIFI NFPSGLVLYW
LVNNTISIFQ QYYITRKNA
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