Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_974 |
Symbol | |
ID | 8657906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 905073 |
End bp | 905837 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical periplasmic protein |
Protein accession | YP_003330420 |
Protein GI | 270308362 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.873226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAA AAATATTATT GCCCATAGTA AGCGGTTTAC TGGTAGTTTC ACTGGCCGGA GGCATAGCAG GGTGTGCTTC TACTACCACT GACGAAACAG ATAATACGGA CAGCCCCGGC GTTATCTGGA GCCAGCAAAA TACCGGTGTT TGGGTAAACG GAAGCGGTGC GGTCACCGTC AGCCCTGACG TAGCCATTTT GACTCTTGGA GTAGAAAGCA CGGGTATCAG CATAGAGACA GCCCAGGCTC AGGCTGCTCA GGCCATGAAT GCCATGATAA ACTCCCTTAA GGCCAACGGT GTGCTGGAAA AAGATATCAA AACCAGCAGC TTTTATATCT ACCCTGTTAC CGAATGGGTT GATAACAAGT CTACTATTGT GGGTTATAGG GTAAGCAATC AGGCAGAAGT AAAAATCCGC GAGATTGCCC AGACTGGCAG TATTCTTGAT GACGCAGTCC GAGCTGGTGG AAATGACAGC CGTGTAAACG GTCTGTATTT CTCAATAGAT GACCCCTCTG CTGCCTATGA ACAGGCTCGT GCCCTCGCCA TTCAGGATGC CAAGGCCAAG GCTGAACAAA TGGCTTCCGT GGCTGGCATA AGCTTGGGCA AACTTATTTA CATCTCTGAA ACCAGCAATT ATATACCCCG CTGGGACTAC ACTAAAGATG CAGGTATGGT AAGCTCTGCT CCCGAAATCA CCCCGATTAG TTCAGGGGAA ACCACGGTAA CGGTAACTGT TCAGGCCGTT TACAGTATAA AATAA
|
Protein sequence | MNKKILLPIV SGLLVVSLAG GIAGCASTTT DETDNTDSPG VIWSQQNTGV WVNGSGAVTV SPDVAILTLG VESTGISIET AQAQAAQAMN AMINSLKANG VLEKDIKTSS FYIYPVTEWV DNKSTIVGYR VSNQAEVKIR EIAQTGSILD DAVRAGGNDS RVNGLYFSID DPSAAYEQAR ALAIQDAKAK AEQMASVAGI SLGKLIYISE TSNYIPRWDY TKDAGMVSSA PEITPISSGE TTVTVTVQAV YSIK
|
| |