Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_80 |
Symbol | rdhH |
ID | 8657034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 71874 |
End bp | 72626 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | PP-loop ATPase |
Protein accession | YP_003329581 |
Protein GI | 270307523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATAC CATACTTAAC ATTAATAACT TTCCTGCCCG CAGCGGGAGC TATCTTGATG GCTCTGTGGC CGCGTTTGTC CGGGCGGGCA ATAAAAATCA GCTCACTGCT GCTCACTCTT GTGCCGCTAG TGCTCTCACT AGTGGTCTTT GCCGGATTTG ACCGGAGTAG TTCCATGGCC GGGGTTATAC AGTTTGAAGA AAATCTCCCC TGGATATCCC TTTTAAACGC TAACTACCAC CTTGGCGTTG ACGGTTTAAG TTTGCCTTTC CTGGTTCTGA CTACTTTACT GGGTGTTCTG GCAGTACTTA TCAGCTGGAA AGTAGACCTC AGGGTAAAAG AGTTTTTTGT CTGGTTGCTT ATACTCCAGA CCAGTATTAC AGGCGTATTT GTCTCTCTTG ATTTGCTGCT CTTCTTTATC TTCTGGGAGC TGGAACTGAT ACCCATGTAT TTCCTGATTT CAATCTGGGG TGCCGGGCGT AAAGAGTATT CGGCTCTTAA ATACGTCCTT TACACCCTGT TTGGCGGTGC ATTTATACTG GCCGGTATCC TGATACTTTT CTTTGCCACC GGCAGTCTGG ATATAGCGTC TCTGGCATCT ACGGACCTAA ATAATTTCCT ACGTCCGGCC ATGATGGTGC TTACCTTCTT TATGTTTTTT ATCGGTTTTG CCATCAAGCT TCCGGCTTTC CCCTTCCACA CCTGGCTGCC GGATGCCCAC ACAGACGCAC CTACCGCCGC CAGCGTTATT CTGGCAGGCA CGTTGCTTAA AATGGGCGGC TATGCCATGC TCAGGTTAAA CGTGGCCATG TTCCCTGACG TCTGCCGTGA CTGGGCGCCT TTGATACTGA CTATTGCAGT CATAAACGTA ATTTACGGTG CCGCTATCAC CCTTAAACAA ACAGACATAA AAAGGCTTAT TGCCTACAGT TCGGTAAGCC ACATGGGTTT TGTACTGCTG GGTATATTTA CCCTAGGTGA AATCTCCATG AATGGTGCGG TTCTGCAAAT GTTCAGCCAC GGCATAATCA CCGGCCTGCT CTTTGCCATA ACCGGTGTGG TCATGCACAA TACCCACGAA CGGGATATTA ACAAACTTGG CGGTCTGGCA AAACAAATGC CCCGAACAGC TATCATATTT ATACTGGCCG GTCTGGGGGC AATGGCAGTG CCTGCCACCA GCGGATTTAT CGCCGAAGTC AGCGTATTTT TGGGTTCATT CCAGAGTTCG GTAGTCCCCG GCGGGCAGGT CTTTACCATG CTCTGCCTTT TGGGTTTGGT ACTGGCGGCT GCCTATATAC TCTGGACAGT CCAGAGGGTA TTTTTAGGCC CCGGACTGGA AAAATTCCAG ATGGTAAAAG ATGCCGATAA AACCGAAATA GTTTTTTCAC TGGTATTTTT AGTGGTAATG TTCGGGGTTG GTCTTTATCC CCAAATTGTT GTAGATGTAA TTCAAACCGG AGTGGCCCCG CTGGCGGCCC TTTTCGGCGG ATAG
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Protein sequence | MEKAFVSWSG GKDCSLSLYR SLRDGYDVRY LASMFTEGTG RLYPHHFTPE LLISQAKAIG IPLEVTWTSG QEYTNNYIKM LKGFREEGIT VAVFGDVSVG NPDALEHRMW VERVCQAADM RVVLPLWDED RESIIGDLID SGFETLIVAA DNTNLGKGWL GRKLDNELFE ELKLLNASSP DGKVGLYHTL TVDGPIFRKK LEIADKKIIY KECGLYDGKP AVAPFWYLEL EGCFLVDKPV LIAESAAGLE
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