Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_732 |
Symbol | leuC |
ID | 8657665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 680059 |
End bp | 681312 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | 3-isopropylmalate dehydratase, large subunit |
Protein accession | YP_003330192 |
Protein GI | 270308134 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.999081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACT TAGTTGAAAA AATACTGGCC GCCCACAGTG GCAAAACTCA GGTCAGCCCG GGTGATTTTA TAAACGCCAA GGTAGACTTG GTGCTGGCTA ACGACATTAC CGCACCTATA GCCGTAAAAG AGTTTAAGAA GATTGGGGTC AGCAAAGTAT TTGACCCCAA AAAGATAGTT TTTGTGCCTG ACCATTTTGT ACCCAACAAA GATATTGCAT CTGCCGAACA GGTAAAAATG GTGCGTGAGT TTGCCCGTGA GCAGGGTATA CTCTTTTTTG AATGCGGCAA AATGGGTGTT GAGCATGTAA TCCTGCACGA GCAGGGTCTG GTACTGCCGG GGGATATTGT GGTAGGCGCT GACTCCCATA CCTGCACTTA CGGGGCACTG GGCGCTTTTA CTACCGGCAT GGGCTCAACC GATATAGCCG CCGCCATGGC AACCGGTGAG GTTTGGATGA AAGTCCCCCC CACCATCAAA TTTAACTATA CGGGCAAGCT GCCTAAATGG ATTGGCGGCA AAGACCTTAT TCTGTTTACC ATAGGTCAGA TAGGGGTAGA CGGGGCTTTG TACTCTGCCA TGTATTTCTG CGGAGAGGCC ATTGATGCCC TTTCCATGGA AAACCGCTTT ACCATGTCAA ATATGGCCAT AGAGGCCGGC GGCAAGGCAG GACTTTTCAG GGTTGACGAA AAAACCCTGG AATATGTAAC CCCCAGAGCC AAACGCCAGT ACACGGTTTA TGATAATGAT GCTGATGCAT CTTATGCCAA AACATATAAT TTTGATATTT CCAAGCTTGA GCCCCAGGTA TCACTGCCGC ATTCACCGGC AAATGCCCGT CCCATCAGCC AGATTGGTAA AATAAAGGTT GACCAGGTTA TCATCGGCTC ATGCACCAAC GGCAGGCTGG AAGACCTGGC CATATCTGCC AAGTTACTTG AAGTGAATAA AGTTAACCCT GATTTGCGAA CTATTGTTAT TCCTGGCTCG CAACAGGTCT ATCTAGACGC CCTGAAAGCC GGCTATATTG AAACCTTTAT CAATGCCGGG GTTGCGGTTT CCACTCCCAC CTGCGGTCCT TGCCTCGGCG GGCATATGGG TATTTTGGCC GCCGGTGAAC GCTGTCTGGC AACTACCAAC CGCAATTTTG TAGGGCGTAT GGGCAGCCCC AAGAGCGAAG TATATCTGGC CGGGCCGGCA GTTGCCGCCG CTACCGCCAT CAAGGGGTAC ATTGCCCATC CCGATGAAAT TTAA
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Protein sequence | MMNLVEKILA AHSGKTQVSP GDFINAKVDL VLANDITAPI AVKEFKKIGV SKVFDPKKIV FVPDHFVPNK DIASAEQVKM VREFAREQGI LFFECGKMGV EHVILHEQGL VLPGDIVVGA DSHTCTYGAL GAFTTGMGST DIAAAMATGE VWMKVPPTIK FNYTGKLPKW IGGKDLILFT IGQIGVDGAL YSAMYFCGEA IDALSMENRF TMSNMAIEAG GKAGLFRVDE KTLEYVTPRA KRQYTVYDND ADASYAKTYN FDISKLEPQV SLPHSPANAR PISQIGKIKV DQVIIGSCTN GRLEDLAISA KLLEVNKVNP DLRTIVIPGS QQVYLDALKA GYIETFINAG VAVSTPTCGP CLGGHMGILA AGERCLATTN RNFVGRMGSP KSEVYLAGPA VAAATAIKGY IAHPDEI
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