Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_676 |
Symbol | greA |
ID | 8657609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 631869 |
End bp | 632666 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | transcription elongation factor |
Protein accession | YP_003330141 |
Protein GI | 270308083 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00449564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAACA GCGGCATTAA CCTTGACGAA GCATTAAATC AATATCTTAA CGATAACAGC AATAAGAAAA TTCACCAGAA TTCGCTGGTC CATTTTACCC GCTGGTGCGG AAAGGACAAG CTTGTTTGCC GTATGACTGC CATTGAGGTA TCCCGCTACC CGGAATGCAT CTCTTCTTCT GACAAGGAAG TATCCGTCAA ACTACAGTCT GTACGGGCTT TCCTGACATA CCTGAATGAA CAGGGTTGGG TGGATTACAA TCTTTCTTCG CATATCAAGA TTAAAAAGCT GGCTTCACGA AAATCTGCTG CCCGCACCAA CCAAACTGCC GTTGAAAAAA TACCTATGAC CGCAAGCGGT TATAAAAAAC TGGAAGATGA ACTGAGCACC CTGAAAGGCA AACGGATTGA AGTTATTGAA GAAATGCGTT TGGCTGCCAT GGATAAAGAT ATGCGTGAAA ATGCCCCTTA CCACGCCGCC AAGGAACAAC GCGGCCAGAT TGAAGGGCGC ATAAAAGAAA TAGAACACGA ACTAAAATAT GCCGAAGTCA GCGAATATAC CGATAATAAC ACATCCAAAG TAAATATGGG CAATACCGTA AAACTCCGTG ACCTGAAAAA CGGCGAATGC TGTACCTATA CTCTGGTAAG CCCCAAAGAA ATAGAACCCT TAAAAGGTAA AATATCAGCC TCTTCACCCA TTGGCAAGGC TGTCTTTAAC CGGAACAAGG GGGAACAGAT AGAAATAGAA GTGCCTTCAG GCACTTTACA ATATATAATA GAAGATATAA GCTTTTAA
|
Protein sequence | MQNSGINLDE ALNQYLNDNS NKKIHQNSLV HFTRWCGKDK LVCRMTAIEV SRYPECISSS DKEVSVKLQS VRAFLTYLNE QGWVDYNLSS HIKIKKLASR KSAARTNQTA VEKIPMTASG YKKLEDELST LKGKRIEVIE EMRLAAMDKD MRENAPYHAA KEQRGQIEGR IKEIEHELKY AEVSEYTDNN TSKVNMGNTV KLRDLKNGEC CTYTLVSPKE IEPLKGKISA SSPIGKAVFN RNKGEQIEIE VPSGTLQYII EDISF
|
| |