Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_603 |
Symbol | cdhE |
ID | 8657539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 566703 |
End bp | 568049 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | carbon-monoxide dehydrogenase, corrinoid/iron-sulfur protein, gamma subunit |
Protein accession | YP_003330080 |
Protein GI | 270308022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCTA CCGGTATAGA AATTTATAAA TTTTTACCCC GAACCAATTG CGGCGAATGC GGCGTACCCA CTTGTCTGGC ATTCGCCATG AGTCTGGCAG GCGGCAGAGC CGAACTTTCT TCCTGCCCCT ACGTGTCGGA AGAAGCCAAA CAGAAGCTGG AAGAAGCTTC CGCCCCCCCG GTCAAAACAG TGAGCATAGG TACGGGTAAT TACGCCTTTA AAACAGGCGG CGAAACTGTC ATGCACCGCC ATGAAAAGCG CTTTGAGCAC CAGCCCGGTA TTGCCCTGCT CATCTCAGAC AACCTGAGCG AGACGGAACA GGATGCCAAA CTGACCGCTT TCAACCGCTT TCAGTACAAA CGGGTGGGTG CCATACTGAA ACCGGATATG CTGGCACTCA GGGCAGACAG CGACTCAGGT GAAAAATACC TGAAGCTGGT CAAACTGGTT GCCGAAAAAT GCCCGGCTAG CCTCATGCTG ATGTGTGCAG ATACCGCCGT ACTTGATGAA TCTTTGAAGA TTTGCGCTGA ACACAAGCCG CTTCTTTACG CCGCCACAGC CGAAAACAGC AGCGAAATGG CAGAGCTGGC TAAAAAATAT AACTGCCCGC TGGTAGCCAA AGCGGCTAAC CTAGCAGATT TGGCTGACCT TAGCGTCAAG CTTCAATCAC TGGGAATAAA AGATATTGTG CTGGACAGCT CTGCCGAAAA TTTAAAACAG GCCTTATCTG ACAACGTTGC CATAAGGCGC TCAGCCATTT CGAAAAAATT CCGGCCCATG GGTTTTCCGG TCATCAATTT CCCCTGCCAG ATGACCCAAG ACCCCATGAA AGAGTCACTG TTTGCCGGCA TACTGACTGC CAAATATGCA GGTATACTGG TGCTGTCTGA CTTTAGCGGT GAAACCCTGT TCCCTTTGCT GGTAACACGT ATGAACCTTT ACACCGACCC CCAGCGGCCT TTGGCTACTA CCGAGGGTAT TTATGAAATA AACACCCCGG ATGCCAATTC ACCTGTCATG CTTACCTGCA ATTTTTCGCT GACATATTTT ATTGTCTCCG GTGAGATGGA AAACAGCCGT GTGCCTTGTT ACCTGATGAT AAAAGACACC GAAGGGCTTT CGGTCATGAC CGCCTGGGCA GCAGGCAAAT TCGGGGCTGA TACCATTGGT AAATTTGTAA AAAACAGCGG TATTGCCGCT AAAATCAACC ACCGCAAGTT GATTATACCG GGCTACGCTT CAATGGAAAG CGGAGGTCTG GAAGAAGAAT TATCCGGTTG GGAGATAATG GTCGGTCCAC GTGAAGCCGC TCATATACCG GCCTATTTAA AGCAGTTTAA ACCCTAA
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Protein sequence | MSPTGIEIYK FLPRTNCGEC GVPTCLAFAM SLAGGRAELS SCPYVSEEAK QKLEEASAPP VKTVSIGTGN YAFKTGGETV MHRHEKRFEH QPGIALLISD NLSETEQDAK LTAFNRFQYK RVGAILKPDM LALRADSDSG EKYLKLVKLV AEKCPASLML MCADTAVLDE SLKICAEHKP LLYAATAENS SEMAELAKKY NCPLVAKAAN LADLADLSVK LQSLGIKDIV LDSSAENLKQ ALSDNVAIRR SAISKKFRPM GFPVINFPCQ MTQDPMKESL FAGILTAKYA GILVLSDFSG ETLFPLLVTR MNLYTDPQRP LATTEGIYEI NTPDANSPVM LTCNFSLTYF IVSGEMENSR VPCYLMIKDT EGLSVMTAWA AGKFGADTIG KFVKNSGIAA KINHRKLIIP GYASMESGGL EEELSGWEIM VGPREAAHIP AYLKQFKP
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