Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_413 |
Symbol | rpsL |
ID | 8657354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 396774 |
End bp | 397208 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | ribosomal protein S12 |
Protein accession | YP_003329896 |
Protein GI | 270307838 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000235971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAACGG TTAATCAGCT AGTAAGAAAA GGGCGCTCAA GTGCGGCCAA GAAGTACAAA GCACCTGCGC TGCATTACAG TTTCAATTCT CTGCGCAACA AGGTAGCCTT CGGTGACGGT TCCCCCCAGA AGAGGGGCGT CTGCACCCAG GTAAAGACTA CTACCCCCAA AAAGCCGAAT TCGGCTTTGC GCAAGATTGC CAGAGTAAGG CTGAGCAACC ATATGGAAGT TACTGCATAT ATCCCCGGTG AAGGCCATAA TCTTCAGGAG CACTCTGTGG TTCTGATACG TGGCGGCCGC GTCCCTGACT TACCGGGTGT TCGCTATCAC ATCATCCGCG GTACTCTTGA TACCGCCGGT GTGGCAAATC GGCAGCAGGG CCGTAGCAGA TACGGCGCCA AAAAGGGCAA AGCCGCTCCT GCCAAGAAGA AATAA
|
Protein sequence | MPTVNQLVRK GRSSAAKKYK APALHYSFNS LRNKVAFGDG SPQKRGVCTQ VKTTTPKKPN SALRKIARVR LSNHMEVTAY IPGEGHNLQE HSVVLIRGGR VPDLPGVRYH IIRGTLDTAG VANRQQGRSR YGAKKGKAAP AKKK
|
| |